MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P2

Family name MIR-2285 (all species)
Seed AAACGUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285bf-1
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037333.1: 92907304-92907363 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUAAGCCCGAGUGUUACAUGGGGUUGGCCAAAACGUUCGUUCAGGUUUUUCUAGAAUAUUUUGCAGGAAAACACGAACAAACUUUUUGGCCAGCCCAAUAUUACUUUCAUAUUUAUAGA
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Structure
        10        20          30        40        50         
GGUAAGCCCGAGUGUUACAUG--|            C   C    AG       UAGAAU 
                       GGGUUGGCCAAAA GUU GUUC  GUUUUUC      A
                       CCCGACCGGUUUU CAA CAAG  CAAAAGG      U
AGAUAUUUAUACUUUCAUUAUAA^            U   A    CA       ACGUUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2285-P2_5p

mirBase accessionNone
Sequence
0- AAAACGUUCGUUCAGGUUUUUC -22
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Star sequence

Bta-Mir-2285-P2_3p*

mirBase accessionMIMAT0046382
Sequence
38- AAAACACGAACAAACUUUUUGG -60
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