MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-2285-P4

Family name MIR-2285 (all species)
Seed GAAAGUU
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285ac
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037338.1: 4553412-4553471 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCAUGAGCCCCAGAAAAUACUGGUUGGCCAGAAAGUUUGUUUGGGUUUUUCCGUAAGAUGUAACAGGAAAACCUGAAGAGACUUUUUGGCCCACCCAAUGCAAAGCAGGUUAACAGCAU
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Structure
        10        20          30        40        50         
AUCAUGAGCCCCAGAAAAUACU--|  U             G  UG        CGUAAG 
                        GGU GGCCAGAAAGUUU UU  GGUUUUUC      A
                        CCA CCGGUUUUUCAGA AA  CCAAAAGG      U
UACGACAAUUGGACGAAACGUAAC^  C             G  GU        ACAAUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2285-P4_5p

mirBase accessionNone
Sequence
0- AGAAAGUUUGUUUGGGUUUUUC -22
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Star sequence

Bta-Mir-2285-P4_3p*

mirBase accessionMIMAT0030440
Sequence
38- AAAACCUGAAGAGACUUUUUGG -60
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Proposed targets TargetScanVert: bta-miR-2285ac