MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-2285-P8

Family name MIR-2285 (all species)
Seed AAACCGG
Species Cow (Bos taurus)
MiRBase ID bta-mir-2285k-5
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037330.1: 53401653-53401712 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGCCAUUUUCCAUAAUAUUGGGUUGGCCAGAAAGUUCAUUCAGGUUUUUCUUUAACAGCUUGCUGAAAAACCGGAAUGAACUUUUUGGUCAACCCAAUAUAUCCUUCUCAUUUAACUC
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Structure
        10          20        30        40        50         
UUGGCCAUUUUCCAUAA--|                         A        UUUAAC 
                   UAUUGGGUUGGCCAGAAAGUUCAUUC GGUUUUUC      A
                   AUAACCCAACUGGUUUUUCAAGUAAG CCAAAAAG      G
CUCAAUUUACUCUUCCUAU^                         G        UCGUUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P8_5p*

mirBase accessionNone
Sequence
0- AGAAAGUUCAUUCAGGUUUUUC -22
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Mature sequence

Bta-Mir-2285-P8_3p

mirBase accessionMIMAT0024586
Sequence
38- AAAACCGGAAUGAACUUUUUGG -60
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Proposed targets TargetScanVert: bta-miR-2285k