MirGeneDB ID | Bta-Mir-2285-P8 |
Family name |
MIR-2285 (all species) |
Seed |
AAACCGG |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-2285k-5
|
Paralogues |
Bta-Mir-2285-P1
Bta-Mir-2285-P2
Bta-Mir-2285-P3
Bta-Mir-2285-P4
Bta-Mir-2285-P5
Bta-Mir-2285-P6
Bta-Mir-2285-P7
Bta-Mir-2285-P9
Bta-Mir-2285-P10
Bta-Mir-2285-P11
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Orthologues |
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Node of Origin (locus) |
B. taurus
|
Node of Origin (family) |
B. taurus
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037330.1: 53401653-53401712 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
UUGGCCAUUUUCCAUAAUAUUGGGUUGGCCAGAAAGUUCAUUCAGGUUUUUCUUUAACAGCUUGCUGAAAAACCGGAAUGAACUUUUUGGUCAACCCAAUAUAUCCUUCUCAUUUAACUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UUGGCCAUUUUCCAUAA--| A UUUAAC
UAUUGGGUUGGCCAGAAAGUUCAUUC GGUUUUUC A
AUAACCCAACUGGUUUUUCAAGUAAG CCAAAAAG G
CUCAAUUUACUCUUCCUAU^ G UCGUUC
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Star sequence |
Bta-Mir-2285-P8_5p* |
mirBase accession | None |
Sequence |
0- AGAAAGUUCAUUCAGGUUUUUC -22
Get sequence
|
Mature sequence |
Bta-Mir-2285-P8_3p |
mirBase accession | MIMAT0024586 |
Sequence |
38- AAAACCGGAAUGAACUUUUUGG -60
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2285k
|