MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P11

Family name MIR-2285 (all species)
Seed AAACCUC
Species Cow (Bos taurus)
MiRBase ID bta-mir-2284w
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 2800939-2800996 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAAGACAUUUCAAUUAUUGGGUUGGCCAAGAGUUUGUUCGGGUUUCUCCAUAAGCUGUAUAGAAAAACCUCAAUGAACUCUUUGGCCAACCCAAUAUUUUGCUGCUUGUAUCACU
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Structure
        10          20        30         40        50        
AAGAAAGACAUUUCAAU--             -|      UG  C      C  CAUAAG 
                   UAUUGGGUUGGCC AAGAGUU  UU GGGUUU UC      \
                   AUAACCCAACCGG UUCUCAA  AA UCCAAA AG      C
UCACUAUGUUCGUCGUUUU             U^      GU  C      A  AUAUGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P11_5p*

mirBase accessionMIMAT0017393
Sequence
0- AAGAGUUUGUUCGGGUUUCUC -21
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Proposed targets TargetScanVert: bta-miR-2284w
Mature sequence

Bta-Mir-2285-P11_3p

mirBase accessionNone
Sequence
36- AAAACCUCAAUGAACUCUUUGG -58
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