MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P9

Family name MIR-2285 (all species)
Seed AACUCGA
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037332.1: 67851823-67851882 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUACUAAAAACUAAGCUGUAUUGGGUUAGCCAAAAAGAUCAUUUGGGUUUUUCUGAUGAUGUUAUGGAAAACUCGAAUGAACUCUUUGGCUGACUCAGUAUUAUGUUUAGCAUCAGAGAG
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Structure
        10          20        30        40        50         
GUACUAAAAACUAAGCU--|                A  A              CUGAUG 
                   GUAUUGGGUUAGCCAAA AG UCAUUUGGGUUUUU      A
                   UAUGACUCAGUCGGUUU UC AGUAAGCUCAAAAG      U
GAGAGACUACGAUUUGUAU^                C  A              GUAUUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P9_5p*

mirBase accessionNone
Sequence
0- CAAAAAGAUCAUUUGGGUUUUU -22
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Mature sequence

Bta-Mir-2285-P9_3p

mirBase accessionNone
Sequence
38- AAACUCGAAUGAACUCUUUGGC -60
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