| MirGeneDB ID | Bta-Mir-328 |
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| Family name |
MIR-328 (all species) |
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| Seed |
UGGCCCU |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-328
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| Paralogues |
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| Orthologues |
Cfa-Mir-328
Cpo-Mir-328
Dno-Mir-328
Ete-Mir-328
Hsa-Mir-328
Mml-Mir-328
Mmu-Mir-328
Ocu-Mir-328
Rno-Mir-328
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037345.1: 34837728-34837788 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUCCUGGGCUGUUUCGGAGCCUGGAGCGGGGGGGCAGGAGGGGCUCAGGGAGAUAGUGUGUGCUGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGUUCCUGAACACGCUGUGCCCAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAUCCUGGGCUGUUUC--| CU AG GA U AGAUAGU
GGAGC GG CGGGGGGGCAG GGGGC CAGGG G
CCUUG CC GCCUUCCCGUC UCCCG GUCCC U
CGACCCGUGUCGCACAAGU^ UC CU UC - CGUCGUG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | Although there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the 3' offset reads in cow in addition to the 3p reads in armadillo where the T is not templated. |
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| 3' NTU |
Yes
|
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| Motifs | No |
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Tissue expression
|
| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-328_5p* |
| mirBase accession | None |
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| Sequence |
0- GGGGGGCAGGAGGGGCUCAGGG -22
Get sequence
|
|---|
| Mature sequence |
Bta-Mir-328_3p |
| mirBase accession | MIMAT0009287 |
|---|
| Sequence |
40- CUGGCCCUCUCUGCCCUUCCG -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-328
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