MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-328

Family name MIR-328 (all species)
Seed UGGCCCU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-328  Cfa-Mir-328  Cja-Mir-328  Cpo-Mir-328  Dno-Mir-328  Eca-Mir-328  Ete-Mir-328  Hsa-Mir-328  Laf-Mir-328  Mml-Mir-328  Mmr-Mir-328  Mmu-Mir-328  Ocu-Mir-328  Rno-Mir-328 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054697.2: 66685052-66685112 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUCCUGGGCUGUCUCAGAGCCUGGAGUGGGGGGGCAGGAGGAGCUCAGGGAGAAAGUGCAUGCAGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGCUCUUGGCCACGCUGUGCCCAGU
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Structure
        10          20        30         40        50        60
AAGUCCUGGGCUGUCUC--     CU  AG           -|   A  U    GAGAAAGU 
                   AGAGC  GG  UGGGGGGGCAG GAGG GC CAGG        G
                   UCUCG  CC  GCCUUCCCGUC CUCC CG GUCC        C
UGACCCGUGUCGCACCGGU     UC  CU           U^   -  -    CCGACGUA 
 .       110       100        90        80          70
Deep sequencing
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CommentAlthough there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the 3' offset reads in cow in addition to the 3p reads in armadillo where the T is not templated.
3' NTU Yes
MotifsNo
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-328_5p*
mirBase accessionNone
Sequence 
0- GGGGGGCAGGAGGAGCUCAGG -21
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Mature sequence

Pab-Mir-328_3p
mirBase accessionNone
Sequence 
40- CUGGCCCUCUCUGCCCUUCCG -61
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