MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-328

Family name MIR-328 (all species)
Seed UGGCCCU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-328  Cfa-Mir-328  Cpo-Mir-328  Dno-Mir-328  Eca-Mir-328  Ete-Mir-328  Hsa-Mir-328  Laf-Mir-328  Mml-Mir-328  Mmr-Mir-328  Mmu-Mir-328  Ocu-Mir-328  Pab-Mir-328  Rno-Mir-328 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021934.1: 21351817-21351877 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUCUUGGGCUGUCUCGGAGCCUGGAGCGGGGGGGCAGGAGGGGCUCAGGGAGAAAGUGCAUGCAGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGCUCCUGGCCACACUGUGCCCUGU
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Structure
        10          20        30        40        50        60
AAGUCUUGGGCUGUCUC--|    CU  AG           GA     U     AGAAAGU 
                   GGAGC  GG  CGGGGGGGCAG  GGGGC CAGGG       G
                   CCUCG  CC  GCCUUCCCGUC  UCCCG GUCCC       C
UGUCCCGUGUCACACCGGU^    UC  CU           UC     -     CGACGUA 
 .       110       100        90        80         70
Deep sequencing
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CommentAlthough there is a templated T at the 3' end of the 3p arm, the post-transcriptional addition of a terminal 3' U is supported by the 3' offset reads in cow in addition to the 3p reads in armadillo where the T is not templated.
3' NTU Yes
MotifsNo
Tissue expression
-   +
To
Star sequence

Cja-Mir-328_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGGGGGCAGGAGGGGCUCAGGG -22
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Mature sequence

Cja-Mir-328_3p
mirBase accessionNone
Sequence 
40- CUGGCCCUCUCUGCCCUUCCG -61
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