| MirGeneDB ID | Bta-Mir-346 |
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| Family name |
MIR-346 (all species) |
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| Seed |
GUCUGCC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-346
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| Paralogues |
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| Orthologues |
Cfa-Mir-346
Cja-Mir-346
Cpo-Mir-346
Eca-Mir-346
Ete-Mir-346
Hsa-Mir-346
Laf-Mir-346
Mml-Mir-346
Mmr-Mir-346
Mmu-Mir-346
Ocu-Mir-346
Pab-Mir-346
Rno-Mir-346
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037355.1: 41000089-41000148 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGCAUGUGGGGGUCUCUGUGUUGGGCGUCUGUCUGCCCGCAUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCUUGCAGCUGCCUGGGCAGAGCGGAUCCUGCGUGGGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAGCAUGUGGGGGUCUC---| G UG U CU - AUG CUGUUG
UGU U GGCG CUGU GCCC GC CCUGCCUCU \
ACG G CCGU GACG CGGG CG GGACGGAGG C
CAGGGUGCGUCCUAGGCGAG^ - GU C UU U G-- AAGUCU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-346_5p |
| mirBase accession | MIMAT0009297 |
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| Sequence |
0- UGUCUGCCCGCAUGCCUGCCUCU -23
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-346
|
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| Star sequence |
Bta-Mir-346_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AGGCAGGGGCUGGGCUUGCAGC -60
Get sequence
|
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