MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-346

Family name MIR-346 (all species)
Seed GUCUGCC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-346  Cfa-Mir-346  Cpo-Mir-346  Eca-Mir-346  Ete-Mir-346  Hsa-Mir-346  Laf-Mir-346  Mml-Mir-346  Mmr-Mir-346  Mmu-Mir-346  Ocu-Mir-346  Pab-Mir-346  Rno-Mir-346 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021926.1: 40264765-40264824 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCGUGUGGGAGGUCUCUGUGUUGGGCGUCUGUCUGCCCGCAUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCGGCUCCUGCGUGGGAC
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Structure
        10           20        30         40        50          
AGCGUGUGGGAGGUCUC---|  G UG    U    CU    -  AUG         CUGUUG 
                    UGU U  GGCG CUGU  GCCC GC   CCUGCCUCU      \
                    ACG G  CCGU GACG  CGGG CG   GGACGGAGG      C
CAGGGUGCGUCCUCGGCGAG^  - GU    C    UC    U  G--         AAGUCU 
.       110       100         90        80          70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-346_5p (predicted)
mirBase accessionNone
Sequence 
0- UGUCUGCCCGCAUGCCUGCCUCU -23
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Star sequence

Cja-Mir-346_3p* (predicted)
mirBase accessionNone
Sequence 
38- AGGCAGGGGCUGGGCCUGCAGC -60
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