| MirGeneDB ID | Cpo-Mir-346 |
|---|
| Family name |
MIR-346 (all species) |
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| Seed |
GUCUGCC |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-346
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-346
Cfa-Mir-346
Ete-Mir-346
Hsa-Mir-346
Mml-Mir-346
Mmu-Mir-346
Ocu-Mir-346
Rno-Mir-346
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_62: 5918308-5918367 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
GGGCGCGGGGAGGUCUCUGUGUUGGGCGUCUGUCUGCCCGCAUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCGGCUCCUAUGUGGGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGCGCGGGGAGGUCUC---| G UG U CU - AUG CUGUUG
UGU U GGCG CUGU GCCC GC CCUGCCUCU \
ACG G CCGU GACG CGGG CG GGACGGAGG C
CAGGGUGUAUCCUCGGCGAG^ - GU C UC U G-- AAGUCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cpo-Mir-346_5p |
| mirBase accession | MIMAT0047184 |
|---|
| Sequence |
0- UGUCUGCCCGCAUGCCUGCCUCU -23
Get sequence
|
|---|
| Star sequence |
Cpo-Mir-346_3p* (predicted) |
| mirBase accession | MIMAT0047185 |
|---|
| Sequence |
38- AGGCAGGGGCUGGGCCUGCAGC -60
Get sequence
|
|---|
