MirGeneDB ID | Mml-Mir-346 |
Family name |
MIR-346 (all species) |
Seed |
GUCUGCC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-346
|
Paralogues |
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Orthologues |
Bta-Mir-346
Cfa-Mir-346
Cja-Mir-346
Cpo-Mir-346
Eca-Mir-346
Ete-Mir-346
Hsa-Mir-346
Laf-Mir-346
Mmr-Mir-346
Mmu-Mir-346
Ocu-Mir-346
Pab-Mir-346
Rno-Mir-346
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014344.1: 51767935-51767994 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
AGCGUGUGGGAGGUCUCUGUGUUGGGCGUCUGUCUGCCCGCAUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCGGCUCCUGCGUGGGAC
Get precursor sequence
|
Structure | 10 20 30 40 50
AGCGUGUGGGAGGUCUC---| G UG U CU - AUG CUGUUG
UGU U GGCG CUGU GCCC GC CCUGCCUCU \
ACG G CCGU GACG CGGG CG GGACGGAGG C
CAGGGUGCGUCCUCGGCGAG^ - GU C UC U G-- AAGUCU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-346_5p |
mirBase accession | MIMAT0006285 |
Sequence |
0- UGUCUGCCCGCAUGCCUGCCUCU -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-346
|
Star sequence |
Mml-Mir-346_3p* (predicted) |
mirBase accession | None |
Sequence |
38- AGGCAGGGGCUGGGCCUGCAGC -60
Get sequence
|