| MirGeneDB ID | Eca-Mir-346 |
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| Family name |
MIR-346 (all species) |
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| Seed |
GUCUGCC |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-346
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| Paralogues |
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| Orthologues |
Bta-Mir-346
Cfa-Mir-346
Cja-Mir-346
Cpo-Mir-346
Ete-Mir-346
Hsa-Mir-346
Laf-Mir-346
Mml-Mir-346
Mmr-Mir-346
Mmu-Mir-346
Ocu-Mir-346
Pab-Mir-346
Rno-Mir-346
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009148.1: 84971779-84971838 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGCGUGUGGGAGGUCUCUGUGUUGGGCGUCUGUCUGCCCGCAUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCGGCUCCUGCGUGGGAC
Get precursor sequence
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| Structure | 10 20 30 40 50
AGCGUGUGGGAGGUCUC---| G UG U CU - AUG CUGUUG
UGU U GGCG CUGU GCCC GC CCUGCCUCU \
ACG G CCGU GACG CGGG CG GGACGGAGG C
CAGGGUGCGUCCUCGGCGAG^ - GU C UC U G-- AAGUCU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-346_5p |
| mirBase accession | MIMAT0012902 |
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| Sequence |
0- UGUCUGCCCGCAUGCCUGCCUCU -23
Get sequence
|
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| Star sequence |
Eca-Mir-346_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
38- AGGCAGGGGCUGGGCCUGCAGC -60
Get sequence
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