| MirGeneDB ID | Laf-Mir-346 |
|---|---|
| Family name | MIR-346 (all species) |
| Seed | GUCUGCC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-346 Cfa-Mir-346 Cja-Mir-346 Cpo-Mir-346 Eca-Mir-346 Ete-Mir-346 Hsa-Mir-346 Mml-Mir-346 Mmr-Mir-346 Mmu-Mir-346 Ocu-Mir-346 Pab-Mir-346 Rno-Mir-346 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010090.1: 10013947-10014004 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGUACGGGGAGGUCUCUGUGUUGGGUGCCUGUCUGCCCGCCUGCCUGCCUCUCUGUCCUCUGAAAGAGGCAGGGGCCGGGCUGCAGCUGCCUGGGCAGAGCUGCUCCUGCGUGCACAGet precursor sequence |
| Structure | 10 20 30 40 50 AAGUACGGGGAGGUCUC---| G UG GC CU - UG CUGUC UGU U GGU CUGU GCCCG CC CCUGCCUCU C ACG G CCG GACG CGGGC GG GGACGGAGA U ACACGUGCGUCCUCGUCGAG^ - GU UC U- C -- AAGUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-346_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUCUGCCCGCCUGCCUGCCUCU -23
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|
| Star sequence | Laf-Mir-346_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AGGCAGGGGCCGGGCUGCAGC -58
Get sequence
|
