MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-3613

Family name MIR-3613 (all species)
Seed GUUGUAC
Species Cow (Bos taurus)
MiRBase ID bta-mir-3613a
Paralogues
Orthologues Cfa-Mir-3613  Cja-Mir-3613  Cpo-Mir-3613  Dno-Mir-3613  Eca-Mir-3613  Ete-Mir-3613  Hsa-Mir-3613  Laf-Mir-3613  Mdo-Mir-3613  Mml-Mir-3613  Mmr-Mir-3613  Neu-Mir-3613  Ocu-Mir-3613  Pab-Mir-3613  Sha-Mir-3613 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037339.1: 19447849-19447907 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCGCACAACGAGAAGGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUGCAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACACCGCUUCAUCUGCAUCUCUCACGAC
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Structure
        10        20          30        40        50         
CGGCGCACAACGAGAAGGUUG--|  U    UU    UA               GUUGCA 
                       GGU UGGA  GUUG  CUUUUUUUUUUGUUC      \
                       CCA ACUU  CAAC  GAAAAAAAAAACAAG      U
CAGCACUCUCUACGUCUACUUCG^  C    CC    CC               GAUUUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-3613_5p

mirBase accessionMIMAT0024574
Sequence
0- UGUUGUACUUUUUUUUUUGUUC -22
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Proposed targets TargetScanVert: bta-miR-3613a
Star sequence

Bta-Mir-3613_3p*

mirBase accessionNone
Sequence
37- ACAAAAAAAAAAGCCCAACCCU -59
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