| MirGeneDB ID | Cfa-Mir-3613 |
|---|
| Family name |
MIR-3613 (all species) |
|---|
| Seed |
GUUGUAC |
|---|
| Species |
Dog (Canis familiaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Bta-Mir-3613
Cpo-Mir-3613
Dno-Mir-3613
Ete-Mir-3613
Hsa-Mir-3613
Mdo-Mir-3613
Mml-Mir-3613
Ocu-Mir-3613
Sha-Mir-3613
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
|---|
Genome context
(canFam3_add) |
VSDE02000093.1: 2150431-2150489 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GCUGGCGCCACAAGACGGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUGCAUUUUCAGGAACAAAAAAAAAAGCCCAACCCUUCACACCGCUUCACGUGCAUCUCUGCGGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCUGGCGCCACAAGACGGUUG--| U UU UA GUUGCA
GGU UGGA GUUG CUUUUUUUUUUGUUC \
CCA ACUU CAAC GAAAAAAAAAACAAG U
CAGGCGUCUCUACGUGCACUUCG^ C CC CC GACUUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Mature sequence |
Cfa-Mir-3613_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
Get sequence
|
|---|
| Star sequence |
Cfa-Mir-3613_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|
|---|
