| MirGeneDB ID | Laf-Mir-3613 |
|---|---|
| Family name | MIR-3613 (all species) |
| Seed | CAAAAAA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-3613 Cfa-Mir-3613 Cja-Mir-3613 Cpo-Mir-3613 Dno-Mir-3613 Eca-Mir-3613 Ete-Mir-3613 Hsa-Mir-3613 Mdo-Mir-3613 Mml-Mir-3613 Mmr-Mir-3613 Neu-Mir-3613 Ocu-Mir-3613 Pab-Mir-3613 Sha-Mir-3613 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010050.1: 31596801-31596859 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGACGCGCAAUGAGAUAGUUGGGUUUGGAUUGUUGUACUUUUUUUUUUGUUCGUUUAAUUUUUAGGAACAAAAAAAAAAGCCCAACCCUUCACACCACUUCAUCUGCAUCUCUCAGGACGet precursor sequence |
| Structure | 10 20 30 40 50 CGACGCGCAAUGAGAUAGUUG--| U UU UA GUUUAA GGU UGGA GUUG CUUUUUUUUUUGUUC \ CCA ACUU CAAC GAAAAAAAAAACAAG U CAGGACUCUCUACGUCUACUUCA^ C CC CC GAUUUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-3613_5p* |
| mirBase accession | None |
| Sequence |
0- UGUUGUACUUUUUUUUUUGUUC -22
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|
| Mature sequence | Laf-Mir-3613_3p |
| mirBase accession | None |
| Sequence |
37- ACAAAAAAAAAAGCCCAACCCU -59
Get sequence
|
