MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-506-P2a

Family name MIR-506 (all species)
Seed ACCCCAA
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-506-P2b1  Bta-Mir-506-P2b2  Bta-Mir-506-P3  Bta-Mir-506-P4b  Bta-Mir-506-P5 
Orthologues Cfa-Mir-506-P2a  Cja-Mir-506-P2a  Cpo-Mir-506-P2a1  Cpo-Mir-506-P2a2  Eca-Mir-506-P2a  Laf-Mir-506  Mmr-Mir-506-P2a  Ocu-Mir-506-P2a 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 30020600-30020657 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUUAACCAUACUUUGUGCAGUAGCCCACCCCAAAGAGUGUCAUUCAGGUAUACUAAAAUAUGAUUGGCGCUCUUUUGAGUGUGGUAAAUCACAACAUGUACAGUCACAUGUGG
Get precursor sequence
Structure
        10          20        30         40        50        
CCACAUUUAACCAUACU--|    CAGUA   -   CCC           U   GGUAUA 
                   UUGUG     GCC CAC   AAAGAGUGUCA UCA      C
                   AACAC     UGG GUG   UUUCUCGCGGU AGU      U
GGUGUACACUGACAUGUAC^    UAAA-   U   AGU           U   AUAAAA 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-506-P2a_5p (predicted)
mirBase accessionNone
Sequence 
0- CACCCCAAAGAGUGUCAUUCA -21
Get sequence
Star sequence

Bta-Mir-506-P2a_3p* (predicted)
mirBase accessionNone
Sequence 
37- AUUGGCGCUCUUUUGAGUGUG -58
Get sequence