MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-506-P5

Family name MIR-506 (all species)
Seed UCAUAGG
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-506-P2a  Bta-Mir-506-P2b1  Bta-Mir-506-P2b2  Bta-Mir-506-P3  Bta-Mir-506-P4b 
Orthologues Cja-Mir-506-P5d1  Cja-Mir-506-P5d2  Cpo-Mir-506-P5  Ete-Mir-506-P5d  Ete-Mir-506-P5e  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Laf-Mir-506  Mml-Mir-506-P5o1  Mml-Mir-506-P5o2  Mml-Mir-506-P5o3  Mml-Mir-506-P5o4a  Mml-Mir-506-P5o4b  Mmr-Mir-506-P5  Ocu-Mir-506-P5  Pab-Mir-506-P5o5  Pab-Mir-506-P5o6  Pab-Mir-506-P5o7  Pab-Mir-506-P5o8  Rno-Mir-506-P5 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 29980078-29980135 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACACUAAGCCAUUCAGUGUACAGUGCCUUUCAUAGGAAGGUGUCAUUCAUGUGGUCUACAAUUUGAAUGCCACUUUUUUGUGAAGAGUAAUGUACAACAUGCAGGGCAUGGUGGUA
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Structure
        10          20        30        40        50        
CCACACUAAGCCAUUCAG--|     G   C               U      UGUGGU 
                    UGUACA UGC UUUCAUAGGAAGGUG CAUUCA      C
                    ACAUGU AUG GAAGUGUUUUUUCAC GUAAGU      U
AUGGUGGUACGGGACGUACA^     A   A               C      UUAACA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-506-P5_5p
mirBase accessionNone
Sequence 
0- UUCAUAGGAAGGUGUCAUUCA -21
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Star sequence

Bta-Mir-506-P5_3p*
mirBase accessionNone
Sequence 
37- AAUGCCACUUUUUUGUGAAGA -58
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