| MirGeneDB ID | Bta-Mir-506-P5 |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | UCAUAGG |
| Species | Cow (Bos taurus) |
| MiRBase ID | |
| Paralogues | Bta-Mir-506-P2a Bta-Mir-506-P2b1 Bta-Mir-506-P2b2 Bta-Mir-506-P3 Bta-Mir-506-P4 |
| Orthologues | Cja-Mir-506-P5d1 Cja-Mir-506-P5d2 Cpo-Mir-506-P5 Ete-Mir-506-P5d Ete-Mir-506-P5e Hsa-Mir-506-P5a1 Hsa-Mir-506-P5a2 Hsa-Mir-506-P5b Hsa-Mir-506-P5c Laf-Mir-506 Mml-Mir-506-P5o1 Mml-Mir-506-P5o2 Mml-Mir-506-P5o3 Mml-Mir-506-P5o4a Mml-Mir-506-P5o4b Mmr-Mir-506-P5 Ocu-Mir-506-P5 Pab-Mir-506-P5o5 Pab-Mir-506-P5o6 Pab-Mir-506-P5o7 Pab-Mir-506-P5o8 Rno-Mir-506-P5 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 29980078-29980135 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCACACUAAGCCAUUCAGUGUACAGUGCCUUUCAUAGGAAGGUGUCAUUCAUGUGGUCUACAAUUUGAAUGCCACUUUUUUGUGAAGAGUAAUGUACAACAUGCAGGGCAUGGUGGUAGet precursor sequence |
| Structure | 10 20 30 40 50 CCACACUAAGCCAUUCAG--| G C U UGUGGU UGUACA UGC UUUCAUAGGAAGGUG CAUUCA C ACAUGU AUG GAAGUGUUUUUUCAC GUAAGU U AUGGUGGUACGGGACGUACA^ A A C UUAACA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UGUG in loop |
| Mature sequence | Bta-Mir-506-P5_5p |
| mirBase accession | None |
| Sequence |
0- UUCAUAGGAAGGUGUCAUUCA -21
Get sequence
|
| Star sequence | Bta-Mir-506-P5_3p* |
| mirBase accession | None |
| Sequence |
37- AAUGCCACUUUUUUGUGAAGA -58
Get sequence
|
