MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-506-P5c

Family name MIR-506 (all species)
Seed UCUCAAG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-513c
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Bta-Mir-506-P5  Cpo-Mir-506-P5  Laf-Mir-506  Mmr-Mir-506-P5  Ocu-Mir-506-P5  Rno-Mir-506-P5 
Node of Origin (locus) H. sapiens
Node of Origin (family) Eutheria
Genome context
(hg38)		 chrX: 147189717-147189774 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P5c)		 Mir-506-P5c chrX: 147189717-147189774 [-] UCSC Ensembl
Mir-506-P5b chrX: 147199057-147199114 [-] UCSC Ensembl
Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUCAGCCAUUCAGCGUACAGUGCCUUUCUCAAGGAGGUGUCGUUUAUGUGAACUAAAAUAUAAAUUUCACCUUUCUGAGAAGAGUAAUGUACAGCAUGCACUGCAUAUGUGGU
Get precursor sequence
Structure
        10          20        30        40        50        
CCACAUUCAGCCAUUCA-  -|    G   C       AG      UC       UGAA 
                  GC GUACA UGC UUUCUCA  GAGGUG  GUUUAUG    C
                  CG CAUGU AUG GAAGAGU  UUCCAC  UAAAUAU    U
UGGUGUAUACGUCACGUA  A^    A   A       CU      UU       AAAA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-506-P5c_5p
mirBase accessionMIMAT0005789
Sequence 
0- UUCUCAAGGAGGUGUCGUUUAUG -23
Get sequence
Proposed targets microrna.org: MIMAT0005789
TargetScanVert: hsa-miR-513c-5p
TargetMiner: hsa-miR-513c-5p
miRDB: MIMAT0005789
Star sequence

Hsa-Mir-506-P5c_3p*
mirBase accessionMIMAT0022728
Sequence 
35- UAAAUUUCACCUUUCUGAGAAGA -58
Get sequence
Proposed targets TargetScanVert: hsa-miR-513c-3p
TargetMiner: hsa-miR-513c-3p
miRDB: MIMAT0022728