| MirGeneDB ID | Hsa-Mir-506-P5c |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | UCUCAAG |
| Species | Human (Homo sapiens) |
| MiRBase ID | hsa-mir-513c |
| Paralogues | Hsa-Mir-506-P1a1 Hsa-Mir-506-P1a2 Hsa-Mir-506-P1a3 Hsa-Mir-506-P1b Hsa-Mir-506-P1c1 Hsa-Mir-506-P1c2 Hsa-Mir-506-P1c3 Hsa-Mir-506-P1d Hsa-Mir-506-P1e Hsa-Mir-506-P2b Hsa-Mir-506-P3 Hsa-Mir-506-P4 Hsa-Mir-506-P5a1 Hsa-Mir-506-P5a2 Hsa-Mir-506-P5b Hsa-Mir-506-P6a Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P6d Hsa-Mir-506-P6e |
| Orthologues | Bta-Mir-506-P5 Cpo-Mir-506-P5 Laf-Mir-506 Mmr-Mir-506-P5 Ocu-Mir-506-P5 Rno-Mir-506-P5 |
| Node of Origin (locus) | H. sapiens |
| Node of Origin (family) | Eutheria |
| Genome context (hg38) |
chrX: 147189717-147189774 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P5c) |
Mir-506-P5c
chrX: 147189717-147189774 [-]
UCSC
Ensembl
Mir-506-P5b chrX: 147199057-147199114 [-] UCSC Ensembl Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCACAUUCAGCCAUUCAGCGUACAGUGCCUUUCUCAAGGAGGUGUCGUUUAUGUGAACUAAAAUAUAAAUUUCACCUUUCUGAGAAGAGUAAUGUACAGCAUGCACUGCAUAUGUGGUGet precursor sequence |
| Structure | 10 20 30 40 50 CCACAUUCAGCCAUUCA- -| G C AG UC UGAA GC GUACA UGC UUUCUCA GAGGUG GUUUAUG C CG CAUGU AUG GAAGAGU UUCCAC UAAAUAU U UGGUGUAUACGUCACGUA A^ A A CU UU AAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Hsa-Mir-506-P5c_5p |
| mirBase accession | MIMAT0005789 |
| Sequence |
0- UUCUCAAGGAGGUGUCGUUUAUG -23
Get sequence
|
| Proposed targets |
microrna.org: MIMAT0005789 TargetScanVert: hsa-miR-513c-5p TargetMiner: hsa-miR-513c-5p miRDB: MIMAT0005789 |
| Star sequence | Hsa-Mir-506-P5c_3p* |
| mirBase accession | MIMAT0022728 |
| Sequence |
35- UAAAUUUCACCUUUCUGAGAAGA -58
Get sequence
|
| Proposed targets |
TargetScanVert: hsa-miR-513c-3p TargetMiner: hsa-miR-513c-3p miRDB: MIMAT0022728 |
