MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-506-P3

Family name MIR-506 (all species)
Seed GAUUGUA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-508
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Bta-Mir-506-P3  Cfa-Mir-506-P3a  Cfa-Mir-506-P3b  Cja-Mir-506-P3  Dno-Mir-506-P3  Eca-Mir-506-P3  Laf-Mir-506  Mml-Mir-506-P3  Mmr-Mir-506-P3  Ocu-Mir-506-P3  Pab-Mir-506-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 147236945-147237002 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P3)
Mir-506-P5c chrX: 147189717-147189774 [-] UCSC Ensembl
Mir-506-P5b chrX: 147199057-147199114 [-] UCSC Ensembl
Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P1e chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P1c3 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P1c2 chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P1c1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P1b chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P1a3 chrX: 147279266-147279323 [-] UCSC Ensembl
Mir-506-P1a1 chrX: 147281957-147282014 [-] UCSC Ensembl
Mir-506-P1a2 chrX: 147284655-147284712 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCACCACCUUCAGCUGAGUGUAGUGCCCUACUCCAGAGGGCGUCACUCAUGUAAACUAAAACAUGAUUGUAGCCUUUUGGAGUAGAGUAAUACACAUCACGUAACGCAUAUUUGGU
Get precursor sequence
Structure
        10          20        30        40        50        
AGCCACCACCUUCAGCU-  -|    G   C              GU  C     UAAA 
                  GA GUGUA UGC CUACUCCAGAGGGC  CA UCAUG    C
                  CU CACAU AUG GAUGAGGUUUUCCG  GU AGUAC    U
UGGUUUAUACGCAAUGCA  A^    A   A              AU  U     AAAA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-506-P3_5p*

mirBase accessionMIMAT0004778
Sequence
0- UACUCCAGAGGGCGUCACUCAUG -23
Get sequence
Proposed targets microrna.org: MIMAT0004778
TargetScanVert: hsa-miR-508-5p
TargetMiner: hsa-miR-508-5p
miRDB: MIMAT0004778
Mature sequence

Hsa-Mir-506-P3_3p

mirBase accessionMIMAT0002880
Sequence
35- UGAUUGUAGCCUUUUGGAGUAGA -58
Get sequence
Proposed targets microrna.org: MIMAT0002880
TargetScanVert: hsa-miR-508-3p
TargetMiner: hsa-miR-508-3p
miRDB: MIMAT0002880