MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-506-P5a2

Family name MIR-506 (all species)
Seed UCACAGG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-513a-1
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Bta-Mir-506-P5  Cpo-Mir-506-P5  Laf-Mir-506  Mmr-Mir-506-P5  Ocu-Mir-506-P5  Rno-Mir-506-P5 
Node of Origin (locus) H. sapiens
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 147213498-147213555 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P5a2)
Mir-506-P5c chrX: 147189717-147189774 [-] UCSC Ensembl
Mir-506-P5b chrX: 147199057-147199114 [-] UCSC Ensembl
Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P1e chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P1c3 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P1c2 chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P1c1 chrX: 147260549-147260606 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUCAGCCAUUCAGCGUACAGUGCCUUUCACAGGGAGGUGUCAUUUAUGUGAACUAAAAUAUAAAUUUCACCUUUCUGAGAAGGGUAAUGUACAGCAUGCACUGCAUAUGUGGU
Get precursor sequence
Structure
        10          20        30        40        50        
CCACAUUCAGCCAUUCA-  -|    G        A   GG     UC       UGAA 
                  GC GUACA UGCCUUUC CAG  AGGUG  AUUUAUG    C
                  CG CAUGU AUGGGAAG GUC  UCCAC  UAAAUAU    U
UGGUGUAUACGUCACGUA  A^    A        A   UU     UU       AAAA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-506-P5a2_5p

mirBase accessionMIMAT0002877
Sequence
0- UUCACAGGGAGGUGUCAUUUAUG -23
Get sequence
Proposed targets microrna.org: MIMAT0002877
TargetScanVert: hsa-miR-513a-5p
TargetMiner: hsa-miR-513a-5p
miRDB: MIMAT0002877
Star sequence

Hsa-Mir-506-P5a2_3p*

mirBase accessionMIMAT0004777
Sequence
35- UAAAUUUCACCUUUCUGAGAAGG -58
Get sequence
Proposed targets microrna.org: MIMAT0004777
TargetScanVert: hsa-miR-513a-3p
TargetMiner: hsa-miR-513a-3p
miRDB: MIMAT0004777