| MirGeneDB ID | Hsa-Mir-506-P6a |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | ACUGGCU |
| Species | Human (Homo sapiens) |
| MiRBase ID | hsa-mir-892b |
| Paralogues | Hsa-Mir-506-P1a1 Hsa-Mir-506-P1a2 Hsa-Mir-506-P1a3 Hsa-Mir-506-P1b Hsa-Mir-506-P1c1 Hsa-Mir-506-P1c2 Hsa-Mir-506-P1c3 Hsa-Mir-506-P1d Hsa-Mir-506-P1e Hsa-Mir-506-P2b Hsa-Mir-506-P3 Hsa-Mir-506-P4 Hsa-Mir-506-P5a1 Hsa-Mir-506-P5a2 Hsa-Mir-506-P5b Hsa-Mir-506-P5c Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P6d Hsa-Mir-506-P6e |
| Orthologues | Cja-Mir-506-P6a Laf-Mir-506 Mml-Mir-506-P6a Pab-Mir-506-P6a |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Eutheria |
| Genome context (hg38) |
chrX: 145997208-145997264 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P6a) |
Mir-506-P6e
chrX: 145992760-145992816 [-]
UCSC
Ensembl
Mir-506-P6d chrX: 145994285-145994341 [-] UCSC Ensembl Mir-506-P6c chrX: 145994794-145994850 [-] UCSC Ensembl Mir-506-P6b chrX: 145996678-145996734 [-] UCSC Ensembl Mir-506-P6a chrX: 145997208-145997264 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGCAAUCAGCCAUGCUGUGUGCAAUGCCCUACUCAGAAAGGUGCCAUUUAUGUAGAUUUUAUGUCACUGGCUCCUUUCUGGGUAGAGCAAGGCUCACCAUGUAUAUAUUUGUGGUGGet precursor sequence |
| Structure | 10 20 30 40 50 CCGCAAUCAGCCAUGCU--| U AA C U UUUAUGUAGA GUG GC UGC CUACUCAGAAAGG GCCA \ CAC CG ACG GAUGGGUCUUUCC CGGU U GUGGUGUUUAUAUAUGUAC^ U GA A U CACUGUAUUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Hsa-Mir-506-P6a_5p* |
| mirBase accession | None |
| Sequence |
0- UACUCAGAAAGGUGCCAUUUAU -22
Get sequence
|
| Mature sequence | Hsa-Mir-506-P6a_3p |
| mirBase accession | MIMAT0004918 |
| Sequence |
35- CACUGGCUCCUUUCUGGGUAGA -57
Get sequence
|
| Proposed targets |
microrna.org: MIMAT0004918 TargetScanVert: hsa-miR-892b TargetMiner: hsa-miR-892b miRDB: MIMAT0004918 |
