MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-506-P6a

Family name MIR-506 (all species)
Seed ACUGGCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-892b
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Cja-Mir-506-P6a  Laf-Mir-506  Mml-Mir-506-P6a  Pab-Mir-506-P6a 
Node of Origin (locus) Simiiformes
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 145997208-145997264 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P6a)
Mir-506-P6e chrX: 145992760-145992816 [-] UCSC Ensembl
Mir-506-P6d chrX: 145994285-145994341 [-] UCSC Ensembl
Mir-506-P6c chrX: 145994794-145994850 [-] UCSC Ensembl
Mir-506-P6b chrX: 145996678-145996734 [-] UCSC Ensembl
Mir-506-P6a chrX: 145997208-145997264 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCAAUCAGCCAUGCUGUGUGCAAUGCCCUACUCAGAAAGGUGCCAUUUAUGUAGAUUUUAUGUCACUGGCUCCUUUCUGGGUAGAGCAAGGCUCACCAUGUAUAUAUUUGUGGUG
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Structure
        10          20        30        40        50        
CCGCAAUCAGCCAUGCU--|  U  AA   C             U    UUUAUGUAGA 
                   GUG GC  UGC CUACUCAGAAAGG GCCA          \
                   CAC CG  ACG GAUGGGUCUUUCC CGGU          U
GUGGUGUUUAUAUAUGUAC^  U  GA   A             U    CACUGUAUUU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-506-P6a_5p*

mirBase accessionNone
Sequence
0- UACUCAGAAAGGUGCCAUUUAU -22
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Mature sequence

Hsa-Mir-506-P6a_3p

mirBase accessionMIMAT0004918
Sequence
35- CACUGGCUCCUUUCUGGGUAGA -57
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Proposed targets microrna.org: MIMAT0004918
TargetScanVert: hsa-miR-892b
TargetMiner: hsa-miR-892b
miRDB: MIMAT0004918