MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-506-P4

Family name MIR-506 (all species)
Seed UAAGGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-506
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Bta-Mir-506-P4b  Cfa-Mir-506-P4b  Cja-Mir-506-P4  Cpo-Mir-506-P4  Dno-Mir-506-P4  Eca-Mir-506-P4a  Eca-Mir-506-P4b  Laf-Mir-506  Mml-Mir-506-P4  Mmr-Mir-506-P4  Mmu-Mir-506-P4  Ocu-Mir-506-P4  Pab-Mir-506-P4  Rno-Mir-506-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chrX: 147230753-147230809 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P4)		 Mir-506-P5c chrX: 147189717-147189774 [-] UCSC Ensembl
Mir-506-P5b chrX: 147199057-147199114 [-] UCSC Ensembl
Mir-506-P5a2 chrX: 147213498-147213555 [-] UCSC Ensembl
Mir-506-P5a1 chrX: 147225860-147225917 [-] UCSC Ensembl
Mir-506-P4 chrX: 147230753-147230809 [-] UCSC Ensembl
Mir-506-P2b chrX: 147231002-147231059 [-] UCSC Ensembl
Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P1e chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P1c3 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P1c2 chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P1c1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P1b chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P1a3 chrX: 147279266-147279323 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCAUCAGCCAUACUAUGUGUAGUGCCUUAUUCAGGAAGGUGUUACUUAAUAGAUUAAUAUUUGUAAGGCACCCUUCUGAGUAGAGUAAUGUGCAACAUGGACAACAUUUGUGGU
Get precursor sequence
Structure
        10          20        30        40          50       
CCACCAUCAGCCAUACUA--  UG  G   C          A     --|  UUAAUAGA 
                    UG  UA UGC UUAUUCAGGA GGUGU  UAC        \
                    AC  GU AUG GAUGAGUCUU CCACG  AUG        U
UGGUGUUUACAACAGGUACA  GU  A   A          C     GA^  UUUAUAAU 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-506-P4_5p*
mirBase accessionMIMAT0022701
Sequence 
0- UAUUCAGGAAGGUGUUACUU -20
Get sequence
Proposed targets TargetScanVert: hsa-miR-506-5p
TargetMiner: hsa-miR-506-5p
miRDB: MIMAT0022701
Mature sequence

Hsa-Mir-506-P4_3p
mirBase accessionMIMAT0002878
Sequence 
35- GUAAGGCACCCUUCUGAGUAGA -57
Get sequence
Proposed targets microrna.org: MIMAT0002878
TargetMiner: hsa-miR-506-3p
miRDB: MIMAT0002878