MirGeneDB 2.1

115 microRNA genes with seed UAAGGCA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-124-P1-v2 aca-mir-124a-1 MIR-124 UAAGGCA None MIMAT0021725 4 29946105 29946162 + Gnathostomata Bilateria No 1
Ami-Mir-124-P1-v2 ami-mir-124-2 MIR-124 UAAGGCA MIMAT0038125 MIMAT0038126 NW_017713071.1 12011227 12011284 - Gnathostomata Bilateria No 1
Bta-Mir-124-P1-v2 bta-mir-124a-2 MIR-124 UAAGGCA None MIMAT0003811 NC_037341.1 29124378 29124435 + Gnathostomata Bilateria No 1
Cfa-Mir-124-P1-v2 cfa-mir-124-2 MIR-124 UAAGGCA None MIMAT0006657 chr29 14264388 14264445 + Gnathostomata Bilateria No 1
Cli-Mir-124-P1-v2 cli-mir-124-1 MIR-124 UAAGGCA MIMAT0038493 MIMAT0038494 scaffold195 1203221 1203278 - Gnathostomata Bilateria No 1
Cmi-Mir-124-P1-v2 None MIR-124 UAAGGCA None None KI635902.1 2043233 2043291 + Gnathostomata Bilateria No 1 1
Cpi-Mir-124-P1-v2 cpi-mir-124-2 MIR-124 UAAGGCA MIMAT0037726 MIMAT0037727 JH584532 2383221 2383278 - Gnathostomata Bilateria No 1
Cpo-Mir-124-P1-v2 cpo-mir-124-2 MIR-124 UAAGGCA MIMAT0046963 MIMAT0046964 scaffold_0 48172170 48172227 - Gnathostomata Bilateria No 1
Dno-Mir-124-P1-v2 dno-mir-124-1 MIR-124 UAAGGCA MIMAT0047612 MIMAT0047613 JH569073 2335337 2335394 + Gnathostomata Bilateria No 1
Ete-Mir-124-P1-v2 None MIR-124 UAAGGCA None None JH980295 76160555 76160612 - Gnathostomata Bilateria No 1
Gga-Mir-124-P1-v2 gga-mir-124a MIR-124 UAAGGCA MIMAT0026511 MIMAT0001128 2 114301745 114301802 + Gnathostomata Bilateria No 1
Gja-Mir-124-P1-v2 None MIR-124 UAAGGCA None None NW_015166423.1 1268829 1268886 + Gnathostomata Bilateria No
Hsa-Mir-124-P1-v2 hsa-mir-124-2 MIR-124 UAAGGCA MIMAT0004591 MIMAT0000422 chr8 64379173 64379230 + Gnathostomata Bilateria No 1
Loc-Mir-124-P1-v2 None MIR-124 UAAGGCA None None LG9 7172449 7172506 - Gnathostomata Bilateria No 1
Mdo-Mir-124-P1-v2 mdo-mir-124a-2 MIR-124 UAAGGCA MIMAT0026660 MIMAT0004102 3 173742240 173742297 - Gnathostomata Bilateria No
Mml-Mir-124-P1-v2 mml-mir-124a-1 MIR-124 UAAGGCA MIMAT0026585 MIMAT0002470 chr8 62428661 62428718 + Gnathostomata Bilateria No 1
Mmu-Mir-124-P1-v2 mmu-mir-124-2 MIR-124 UAAGGCA MIMAT0004527 MIMAT0000134 chr3 17795686 17795743 + Gnathostomata Bilateria No 1
Mun-Mir-124-P1-v2 None MIR-124 UAAGGCA None None 124-P1-v1_LR594632.1:506053194-506053452 101 158 + Gnathostomata Bilateria No 1
Oan-Mir-124-P1-v2 None MIR-124 UAAGGCA None None NC_041734.1 5355242 5355299 - Gnathostomata Bilateria No 1
Ocu-Mir-124-P1-v2 ocu-mir-124-2 MIR-124 UAAGGCA MIMAT0048203 MIMAT0048204 chr3 80281790 80281847 + Gnathostomata Bilateria No 1
Pbv-Mir-124-P1-v2 pbv-mir-124a-1 MIR-124 UAAGGCA MIMAT0038913 MIMAT0038914 KE957509.1 32638 32695 - Gnathostomata Bilateria No 1
Rno-Mir-124-P1-v2 rno-mir-124-2 MIR-124 UAAGGCA MIMAT0004728 MIMAT0000828 chr2 102311627 102311684 + Gnathostomata Bilateria No 1
Sha-Mir-124-P1-v2 None MIR-124 UAAGGCA None None GL841248.1 3221241 3221298 - Gnathostomata Bilateria No
Sto-Mir-124-P1-v2 None MIR-124 UAAGGCA None None BFAA01221544.1 957 1014 + Gnathostomata Bilateria No 1
Tgu-Mir-124-P1-v2 tgu-mir-124-1 MIR-124 UAAGGCA MIMAT0014630 MIMAT0014507 2 116209608 116209665 + Gnathostomata Bilateria No 1
Xtr-Mir-124-P1-v2 xtr-mir-124 MIR-124 UAAGGCA None MIMAT0003683 chr6 103250613 103250670 + Gnathostomata Bilateria No 1
Dre-Mir-124-P1a-v2 dre-mir-124-1 MIR-124 UAAGGCA None MIMAT0001819 chr2 26645328 26645385 - Clupeocephala Bilateria No
Gmo-Mir-124-P1a-v2 gmo-mir-124-1 MIR-124 UAAGGCA None MIMAT0044016 GeneScaffold_3113 66902 66959 - Clupeocephala Bilateria No 1
Mal-Mir-124-P1a-v2 None MIR-124 UAAGGCA None None KV884911.1 738283 738340 + Clupeocephala Bilateria No 1
Dre-Mir-124-P1b-v2 dre-mir-124-3 MIR-124 UAAGGCA MIMAT0031960 MIMAT0001819 chr24 24455662 24455719 + Clupeocephala Bilateria No 1
Gmo-Mir-124-P1b-v2 gmo-mir-124-2 MIR-124 UAAGGCA MIMAT0044327 MIMAT0044016 scaffold02832 13843 13900 + Clupeocephala Bilateria No 1
Mal-Mir-124-P1b-v2 None MIR-124 UAAGGCA None None KV884732.1 543559 543616 + Clupeocephala Bilateria No 1
Tni-Mir-124-P1b-v2 tni-mir-124-1 MIR-124 UAAGGCA None MIMAT0002897 6 3469442 3469499 - Clupeocephala Bilateria No 1
Xla-Mir-124-P1c-v2 None MIR-124 UAAGGCA None None NC_030734.1 119078106 119078163 + X. laevis Bilateria No 1
Xla-Mir-124-P1d-v2 None MIR-124 UAAGGCA None None NC_030735.1 95146970 95147027 + X. laevis Bilateria No 1
Aca-Mir-124-P2-v2 aca-mir-124b MIR-124 UAAGGCA None MIMAT0021726 4 40554197 40554256 - Gnathostomata Bilateria No
Ami-Mir-124-P2-v2 ami-mir-124-1 MIR-124 UAAGGCA MIMAT0038125 MIMAT0038126 NW_017708742.1 1926509 1926568 - Gnathostomata Bilateria No 1
Bta-Mir-124-P2-v2 bta-mir-124a-1 MIR-124 UAAGGCA None MIMAT0003811 NC_037335.1 9301922 9301981 + Gnathostomata Bilateria No
Cfa-Mir-124-P2-v2 cfa-mir-124-1 MIR-124 UAAGGCA None MIMAT0006657 chr25 28188263 28188322 + Gnathostomata Bilateria No
Cmi-Mir-124-P2-v2 None MIR-124 UAAGGCA None None KI635978.1 1048188 1048246 + Gnathostomata Bilateria No 1
Cpi-Mir-124-P2-v2 cpi-mir-124-1 MIR-124 UAAGGCA MIMAT0037726 MIMAT0037727 AHGY01384901 132 191 - Gnathostomata Bilateria No 1
Cpo-Mir-124-P2-v2 cpo-mir-124-1 MIR-124 UAAGGCA MIMAT0046963 MIMAT0046964 scaffold_1 66413101 66413160 + Gnathostomata Bilateria No
Dno-Mir-124-P2-v2 None MIR-124 UAAGGCA None None 1812924288_name_238801685_mate_1812919966 586 645 - Gnathostomata Bilateria No
Ete-Mir-124-P2-v2 None MIR-124 UAAGGCA None None JH980320 18619091 18619150 - Gnathostomata Bilateria No
Gga-Mir-124-P2-v2 None MIR-124 UAAGGCA None None 3 106368950 106369009 - Gnathostomata Bilateria No 1
Gja-Mir-124-P2-v2 None MIR-124 UAAGGCA None None NW_015159711.1 1730997 1731056 + Gnathostomata Bilateria No
Hsa-Mir-124-P2-v2 hsa-mir-124-1 MIR-124 UAAGGCA MIMAT0004591 MIMAT0000422 chr8 9903400 9903459 - Gnathostomata Bilateria No
Loc-Mir-124-P2-v2 None MIR-124 UAAGGCA None None LG1 17368455 17368514 - Gnathostomata Bilateria No 1
Mdo-Mir-124-P2-v2 mdo-mir-124a-1 MIR-124 UAAGGCA MIMAT0026660 MIMAT0004102 1 587846277 587846336 + Gnathostomata Bilateria No 1
Mml-Mir-124-P2-v2 mml-mir-124a-2 MIR-124 UAAGGCA MIMAT0026585 MIMAT0002470 chr8 9901079 9901138 + Gnathostomata Bilateria No
Mmu-Mir-124-P2-v2 mmu-mir-124-1 MIR-124 UAAGGCA MIMAT0004527 MIMAT0000134 chr14 64590670 64590729 + Gnathostomata Bilateria No
Mun-Mir-124-P2-v2 None MIR-124 UAAGGCA None None 124-P2-v1_LR594634.1:393111117-393111257 42 101 - Gnathostomata Bilateria No 1
Ocu-Mir-124-P2-v2 ocu-mir-124-1 MIR-124 UAAGGCA MIMAT0048203 MIMAT0048204 chr2 40110277 40110336 + Gnathostomata Bilateria No
Pbv-Mir-124-P2-v2 pbv-mir-124b MIR-124 UAAGGCA MIMAT0038911 MIMAT0038912 KE954490.1 31654 31713 - Gnathostomata Bilateria No
Rno-Mir-124-P2-v2 rno-mir-124-1 MIR-124 UAAGGCA MIMAT0004728 MIMAT0000828 chr15 47964311 47964370 + Gnathostomata Bilateria No
Sha-Mir-124-P2-v2 None MIR-124 UAAGGCA None None AFEY01209567_ctg7180001773455 789 848 - Gnathostomata Bilateria No 1
Sto-Mir-124-P2-v2 None MIR-124 UAAGGCA None None BFAA01017286.1 17091 17148 + Gnathostomata Bilateria No 1
Tgu-Mir-124-P2-v2 tgu-mir-124-2 MIR-124 UAAGGCA MIMAT0014630 MIMAT0014507 3 3070066 3070125 - Gnathostomata Bilateria No 1
Xtr-Mir-124-P2-v2 None MIR-124 UAAGGCA None None chrUn_NW_016683662v1 88200 88259 + Gnathostomata Bilateria No 1
Dre-Mir-124-P2a-v2 dre-mir-124-2 MIR-124 UAAGGCA MIMAT0031960 MIMAT0001819 chr20 38905542 38905601 - Clupeocephala Bilateria No 1
Mal-Mir-124-P2a-v2 None MIR-124 UAAGGCA None None KV884890.1 889933 889992 + Clupeocephala Bilateria No 1
Tni-Mir-124-P2a-v2 tni-mir-124-2 MIR-124 UAAGGCA None MIMAT0002897 14 9544671 9544730 - Clupeocephala Bilateria No 1
Tni-Mir-124-P2b-v2 tni-mir-124-2 MIR-124 UAAGGCA None MIMAT0002897 14 9544671 9544730 - Clupeocephala Bilateria No 1
Xla-Mir-124-P2c-v2 None MIR-124 UAAGGCA None None NC_030732.1 152280148 152280207 + X. laevis Bilateria No 1
Xla-Mir-124-P2d-v2 xla-mir-124-1 MIR-124 UAAGGCA MIMAT0046430 MIMAT0046429 NC_030733.1 131342483 131342542 + X. laevis Bilateria No 1
Aca-Mir-124-P3-v2 aca-mir-124a-2 MIR-124 UAAGGCA None MIMAT0021725 4 153195204 153195262 + Gnathostomata Bilateria No
Ami-Mir-124-P3-v2 ami-mir-124-3 MIR-124 UAAGGCA MIMAT0038125 MIMAT0038126 NW_017708899.1 760235 760293 - Gnathostomata Bilateria No 1
Bta-Mir-124-P3-v2 bta-mir-124b MIR-124 UAAGGCA None MIMAT0013774 NC_037340.1 54355354 54355412 - Gnathostomata Bilateria No 1 1
Cfa-Mir-124-P3-v2 cfa-mir-124-3 MIR-124 UAAGGCA None MIMAT0006657 chr24 46916731 46916789 + Gnathostomata Bilateria No 1 1
Cli-Mir-124-P3-v2 cli-mir-124-2 MIR-124 UAAGGCA MIMAT0038495 MIMAT0038494 scaffold36 2496184 2496242 - Gnathostomata Bilateria No 1
Cmi-Mir-124-P3-v2 None MIR-124 UAAGGCA None None KI635860.1 243937 243996 - Gnathostomata Bilateria No 1 1
Cpi-Mir-124-P3-v2 cpi-mir-124-3 MIR-124 UAAGGCA MIMAT0037726 MIMAT0037727 JH584900 191298 191356 + Gnathostomata Bilateria No 1
Cpo-Mir-124-P3-v2 None MIR-124 UAAGGCA None None 1606391089 53 111 - Gnathostomata Bilateria No 1 1
Dno-Mir-124-P3-v2 dno-mir-124-2 MIR-124 UAAGGCA MIMAT0047612 MIMAT0047613 JH582541 37794 37852 - Gnathostomata Bilateria No 1 1
Gga-Mir-124-P3-v2 gga-mir-124a-2 MIR-124 UAAGGCA MIMAT0026511 MIMAT0001128 20 8692494 8692552 + Gnathostomata Bilateria No 1
Gja-Mir-124-P3-v2 None MIR-124 UAAGGCA None None NW_015169811.1 128459 128517 - Gnathostomata Bilateria No 1
Hsa-Mir-124-P3-v2 hsa-mir-124-3 MIR-124 UAAGGCA MIMAT0004591 MIMAT0000422 chr20 63178514 63178572 + Gnathostomata Bilateria No 1 1
Loc-Mir-124-P3-v2 None MIR-124 UAAGGCA None None LG18 10341024 10341082 + Gnathostomata Bilateria No
Mdo-Mir-124-P3-v2 mdo-mir-124a-3 MIR-124 UAAGGCA MIMAT0026660 MIMAT0004102 1 474834584 474834642 - Gnathostomata Bilateria No 1
Mml-Mir-124-P3-v2 None MIR-124 UAAGGCA None None chr10 1130241 1130299 - Gnathostomata Bilateria No 1 1
Mmu-Mir-124-P3-v2 mmu-mir-124-3 MIR-124 UAAGGCA MIMAT0004527 MIMAT0000134 chr2 180894045 180894103 + Gnathostomata Bilateria No 1 1
Mun-Mir-124-P3-v2 None MIR-124 UAAGGCA None None 124-P3-v1_LR594639.1:199006197-199006338 43 101 - Gnathostomata Bilateria No 1
Oan-Mir-124-P3-v2 None MIR-124 UAAGGCA None None NC_041735.1 18324190 18324248 + Gnathostomata Bilateria No 1
Ocu-Mir-124-P3-v2 None MIR-124 UAAGGCA None None 638693847 43 101 - Gnathostomata Bilateria No 1
Pbv-Mir-124-P3-v2 pbv-mir-124a-2 MIR-124 UAAGGCA MIMAT0038913 MIMAT0038914 KE954357.1 247519 247577 + Gnathostomata Bilateria No 1
Rno-Mir-124-P3-v2 rno-mir-124-3 MIR-124 UAAGGCA MIMAT0004728 MIMAT0000828 chr3 176406219 176406277 + Gnathostomata Bilateria No 1 1
Sha-Mir-124-P3-v2 None MIR-124 UAAGGCA None None GL834660.1 754514 754572 - Gnathostomata Bilateria No 1
Sto-Mir-124-P3-v2 None MIR-124 UAAGGCA None None BFAA01001931.1 291236 291294 + Gnathostomata Bilateria No 1 1
Tgu-Mir-124-P3-v2 tgu-mir-124-3 MIR-124 UAAGGCA MIMAT0014630 MIMAT0014630 20 9140409 9140467 - Gnathostomata Bilateria No 1
Xtr-Mir-124-P3-v2 None MIR-124 UAAGGCA None None chrUn_NW_016684779v1 2998 3056 - Gnathostomata Bilateria No 1
Dre-Mir-124-P3a-v2 dre-mir-124-5 MIR-124 UAAGGCA MIMAT0031960 MIMAT0001819 chr23 17783451 17783509 + Clupeocephala Bilateria No 1
Gmo-Mir-124-P3a-v2 gmo-mir-124-3 MIR-124 UAAGGCA MIMAT0044015 MIMAT0044016 contig170278 229 287 + Clupeocephala Bilateria No 1
Mal-Mir-124-P3a-v2 None MIR-124 UAAGGCA None None KV884779.1 527081 527139 + Clupeocephala Bilateria No 1
Dre-Mir-124-P3b-v2 dre-mir-124-6 MIR-124 UAAGGCA MIMAT0031962 MIMAT0001819 chr8 23122789 23122847 - Clupeocephala Bilateria No 1
Gmo-Mir-124-P3b-v2 gmo-mir-124-4 MIR-124 UAAGGCA None MIMAT0044016 GeneScaffold_1609 326970 327029 + Clupeocephala Bilateria No 1
Mal-Mir-124-P3b-v2 None MIR-124 UAAGGCA None None KV884806.1 1247208 1247266 - Clupeocephala Bilateria No 1
Xla-Mir-124-P3c-v2 None MIR-124 UAAGGCA None None NC_030740.1 17160989 17161047 + X. laevis Bilateria No 1
Xla-Mir-124-P3d-v2 xla-mir-124-2 MIR-124 UAAGGCA MIMAT0046428 MIMAT0046429 NC_030741.1 15894757 15894815 + X. laevis Bilateria No 1 1
Aca-Mir-124-P4-v2 aca-mir-124a-3 MIR-124 UAAGGCA None MIMAT0021725 GL344007.1 104545 104603 - Gnathostomata Bilateria No 1
Ami-Mir-124-P4-v2 ami-mir-124-4 MIR-124 UAAGGCA MIMAT0038125 MIMAT0038126 NW_017710560.1 925379 925436 - Gnathostomata Bilateria No 1
Cpi-Mir-124-P4-v2 cpi-mir-124-4 MIR-124 UAAGGCA MIMAT0037726 MIMAT0037727 JH584506 1072250 1072307 + Gnathostomata Bilateria No
Dre-Mir-124-P4-v2 dre-mir-124-4 MIR-124 UAAGGCA MIMAT0031961 MIMAT0001819 chr17 27402274 27402332 + Gnathostomata Bilateria No 1
Gga-Mir-124-P4-v2 gga-mir-124b MIR-124 UAAGGCA None MIMAT0001174 23 2379323 2379380 + Gnathostomata Bilateria No
Gja-Mir-124-P4-v2 None MIR-124 UAAGGCA None None NW_015174874.1 301873 301931 - Gnathostomata Bilateria No 1
Gmo-Mir-124-P4-v2 gmo-mir-124-5 MIR-124 UAAGGCA None MIMAT0044016 GeneScaffold_1848 51872 51930 + Gnathostomata Bilateria No 1
Loc-Mir-124-P4-v2 None MIR-124 UAAGGCA None None LG6 10129561 10129618 - Gnathostomata Bilateria No 1
Mal-Mir-124-P4-v2 None MIR-124 UAAGGCA None None KV884701.1 3952770 3952828 + Gnathostomata Bilateria No 1
Mun-Mir-124-P4-v2 None MIR-124 UAAGGCA None None 124-P4-v1_LR594642.1:191086464-191086606 44 101 - Gnathostomata Bilateria No 1
Sto-Mir-124-P4-v2 None MIR-124 UAAGGCA None None BFAA01005146.1 20484 20541 + Gnathostomata Bilateria No
Tni-Mir-124-P4-v2 tni-mir-124-3 MIR-124 UAAGGCA None MIMAT0002897 10 7519420 7519478 + Gnathostomata Bilateria No 1
Pbv-Mir-124-P4b-v2 pbv-mir-124a-3 MIR-124 UAAGGCA MIMAT0038913 MIMAT0038914 KE955369.1 120833 120891 + P. bivittatus Bilateria No 1 1
Ebu-Mir-124-P5-v2 None MIR-124 UAAGGCA None None FYBX02000126.1 461510 461567 - E. burgeri Bilateria No
Ebu-Mir-124-P6-v2 None MIR-124 UAAGGCA None None FYBX02009160.1 4154023 4154079 - E. burgeri Bilateria No 1
Hsa-Mir-506-P1 hsa-mir-506 MIR-506 AUUCAGG MIMAT0022701 MIMAT0002878 chrX 147230753 147230809 - Eutheria Eutheria No 1
Mml-Mir-506-P1 mml-mir-506 MIR-506 UAAGGCA MIMAT0026745 MIMAT0005762 chrX 140946831 140946887 - Eutheria Eutheria No 1

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