Mir-124-P2-v2

MirGeneDB ID

Mml-Mir-124-P2-v2

Family name

MIR-124 (all species)

Seed

UAAGGCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-124a-2

Paralogues

Mml-Mir-124-P1-v1 Mml-Mir-124-P1-v2 Mml-Mir-124-P2-v1 Mml-Mir-124-P3-v1 Mml-Mir-124-P3-v2

Orthologues

Aae-Mir-124 Aca-Mir-124-P2-v1 Aca-Mir-124-P2-v2 Ami-Mir-124-P2-v1 Ami-Mir-124-P2-v2 Asu-Mir-124 Bfl-Mir-124 Bge-Mir-124 Bla-Mir-124 Bta-Mir-124-P2-v1 Bta-Mir-124-P2-v2 Cel-Mir-124 Cfa-Mir-124-P2-v1 Cfa-Mir-124-P2-v2 Cmi-Mir-124-P2-v1 Cmi-Mir-124-P2-v2 Cpi-Mir-124-P2-v1 Cpi-Mir-124-P2-v2 Cpo-Mir-124-P2-v1 Cpo-Mir-124-P2-v2 Cte-Mir-124 Dan-Mir-124 Dma-Mir-124 Dme-Mir-124 Dmo-Mir-124 Dno-Mir-124-P2-v1 Dno-Mir-124-P2-v2 Dpu-Mir-124 Dre-Mir-124-P2a-v1 Dre-Mir-124-P2a-v2 Dsi-Mir-124 Dya-Mir-124 Esc-Mir-124 Ete-Mir-124-P2-v1 Ete-Mir-124-P2-v2 Gga-Mir-124-P2-v1 Gga-Mir-124-P2-v2 Gja-Mir-124-P2-v1 Gja-Mir-124-P2-v2 Hme-Mir-124 Hsa-Mir-124-P2-v1 Hsa-Mir-124-P2-v2 Isc-Mir-124 Lan-Mir-124 Lch-Mir-124-P2 Loc-Mir-124-P2-v1 Loc-Mir-124-P2-v2 Mal-Mir-124-P2a-v1 Mal-Mir-124-P2a-v2 Mdo-Mir-124-P2-v1 Mdo-Mir-124-P2-v2 Mmu-Mir-124-P2-v1 Mmu-Mir-124-P2-v2 Mun-Mir-124-P2-v1 Mun-Mir-124-P2-v2 Npo-Mir-124 Obi-Mir-124 Ocu-Mir-124-P2-v1 Ocu-Mir-124-P2-v2 Ovu-Mir-124 Pbv-Mir-124-P2-v1 Pbv-Mir-124-P2-v2 Pfl-Mir-124 Pma-Mir-124-o2 Pmi-Mir-124 Rno-Mir-124-P2-v1 Rno-Mir-124-P2-v2 Sha-Mir-124-P2-v1 Sha-Mir-124-P2-v2 Sko-Mir-124 Spt-Mir-124-P2 Spu-Mir-124 Sto-Mir-124-P2-v1 Sto-Mir-124-P2-v2 Tca-Mir-124 Tgu-Mir-124-P2-v1 Tgu-Mir-124-P2-v2 Tni-Mir-124-P2a-v1 Tni-Mir-124-P2a-v2 Tni-Mir-124-P2b-v1 Tni-Mir-124-P2b-v2 Xbo-Mir-124 Xla-Mir-124-P2c-v1 Xla-Mir-124-P2c-v2 Xla-Mir-124-P2d-v1 Xla-Mir-124-P2d-v2 Xtr-Mir-124-P2-v1 Xtr-Mir-124-P2-v2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(rheMac8_trace)

chr8: 9901079-9901138 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-124-P2-v2)

Mir-124-P2-v1 chr8: 9901079-9901139 [+] UCSC Ensembl
Mir-124-P2-v2 chr8: 9901079-9901138 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UUCCUUCCUCAGGAGAAAGGCCUCUCUCUCCGUGUUCACAGCGGACCUUGAUUUAAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAAUGGGGCUGGCUGAGCACCGUGGGUCG

Get precursor sequence

Structure

        10         20        30        40        50          
UUCCUUCCUCAGGAGAAA-|     UC   CC        A   GA        UAAAUG 
                   GGCCUC  UCU  GUGUUCAC GCG  CCUUGAUU      \
                   UCGGGG  AGA  CGUAAGUG CGC  GGAAUUAA      U
GCUGGGUGCCACGAGUCGG^     UA   AC        G   AC        CAUACC 
.       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-124-P2-v2_5p*

mirBase accession

MIMAT0026585

Sequence

0- CGUGUUCACAGCGGACCUUGAUU -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-124a-5p

Mature sequence

Mml-Mir-124-P2-v2_3p

mirBase accession

MIMAT0002470

Sequence

38- UUAAGGCACGCGGUGAAUGCCA -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-124a-3p