MirGeneDB ID | Dno-Mir-506-P4 |
---|---|
Family name | MIR-506 (all species) |
Seed | ACUCAGG |
Species | Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID | dno-mir-506 |
Paralogues | Dno-Mir-506-P1i Dno-Mir-506-P1j Dno-Mir-506-P1k Dno-Mir-506-P1l Dno-Mir-506-P2b Dno-Mir-506-P3 |
Orthologues | Bta-Mir-506-P4 Cfa-Mir-506-P4 Cja-Mir-506-P4 Cpo-Mir-506-P4 Eca-Mir-506-P4a Eca-Mir-506-P4b Hsa-Mir-506-P4 Laf-Mir-506 Mml-Mir-506-P4 Mmr-Mir-506-P4 Mmu-Mir-506-P4 Ocu-Mir-506-P4 Pab-Mir-506-P4 Rno-Mir-506-P4 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (dasNov3) |
JH571138: 1950414-1950474 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CCAUCUUUAGCCACUCUGUGUGCAGUGCCCUACUCAGGAAGGUUCAGUUAAGUAUUUAGACUAUAAUAUUAACCGCACCCUUCUGAGUAGAGUAAUGCUCAACUAUGACGCCAUUUGGGGGGet precursor sequence |
Structure | 10 20 30 40 50 CCAUCUUUAGCCACUCUG--| U G C A UCA GUAUUUAG UG GCA UGC CUACUCAGGA GGU GUUAA \ AC CGU AUG GAUGAGUCUU CCA CAAUU A GGGGGUUUACCGCAGUAUCA^ U A A C CGC AUAAUAUC . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Mature sequence | Dno-Mir-506-P4_5p (predicted) |
mirBase accession | MIMAT0047950 |
Sequence |
0- UACUCAGGAAGGUUCAGUUAAGU -23
Get sequence
|
Co-mature sequence | Dno-Mir-506-P4_3p (predicted) |
mirBase accession | MIMAT0047951 |
Sequence |
38- UUAACCGCACCCUUCUGAGUAGA -61
Get sequence
|