MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-506-P4

Family name MIR-506 (all species)
Seed ACUCAGU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-201
Paralogues Mmu-Mir-506-P2b  Mmu-Mir-506-P11a  Mmu-Mir-506-P11b1  Mmu-Mir-506-P11b2  Mmu-Mir-506-P11c1  Mmu-Mir-506-P11c2  Mmu-Mir-506-P11d  Mmu-Mir-506-P12  Mmu-Mir-506-P13  Mmu-Mir-506-P14  Mmu-Mir-506-P15  Mmu-Mir-506-P16  Mmu-Mir-506-P17  Mmu-Mir-506-P18  Mmu-Mir-506-P19  Mmu-Mir-506-P20  Mmu-Mir-506-P21  Mmu-Mir-506-P22  Mmu-Mir-506-P23  Mmu-Mir-506-P24 
Orthologues Bta-Mir-506-P4b  Cfa-Mir-506-P4b  Cja-Mir-506-P4  Cpo-Mir-506-P4  Dno-Mir-506-P4  Eca-Mir-506-P4a  Eca-Mir-506-P4b  Hsa-Mir-506-P4  Laf-Mir-506  Mml-Mir-506-P4  Mmr-Mir-506-P4  Ocu-Mir-506-P4  Pab-Mir-506-P4  Rno-Mir-506-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chrX: 67988099-67988156 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P4)		 Mir-506-P4 chrX: 67988099-67988156 [-] UCSC Ensembl
Mir-506-P2b chrX: 67988383-67988440 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUACUUUCAAUGAUGCUGUGUACAGUACCUUACUCAGUAAGGCAUUGUUCUUCUAUAUUAAUAAAUGAACAGUGCCUUUCUGUGUAGGGUAAUGUGCAACAUGGACAACAUUUGUGGU
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Structure
        10          20        30        40        50        
CUACUUUCAAUGAUGCUG--|     G        U   U            UUCUAUA 
                    UGUACA UACCUUAC CAG AAGGCAUUGUUC       U
                    ACGUGU AUGGGAUG GUC UUCCGUGACAAG       U
UGGUGUUUACAACAGGUACA^     A        U   U            UAAAUAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-506-P4_5p
mirBase accessionMIMAT0000234
Sequence 
0- UACUCAGUAAGGCAUUGUUCUUC -23
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Proposed targets microrna.org: MIMAT0000234
TargetScanVert: mmu-miR-201-5p
miRDB: MIMAT0000234
Star sequence

Mmu-Mir-506-P4_3p*
mirBase accessionMIMAT0017001
Sequence 
35- UGAACAGUGCCUUUCUGUGUAGG -58
Get sequence
Proposed targets TargetScanVert: mmu-miR-201-3p
miRDB: MIMAT0017001