MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-506-P2b

Family name MIR-506 (all species)
Seed UUGGUAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-547
Paralogues Mmu-Mir-506-P4  Mmu-Mir-506-P11a  Mmu-Mir-506-P11b1  Mmu-Mir-506-P11b2  Mmu-Mir-506-P11c1  Mmu-Mir-506-P11c2  Mmu-Mir-506-P11d  Mmu-Mir-506-P12  Mmu-Mir-506-P13  Mmu-Mir-506-P14  Mmu-Mir-506-P15  Mmu-Mir-506-P16  Mmu-Mir-506-P17  Mmu-Mir-506-P18  Mmu-Mir-506-P19  Mmu-Mir-506-P20  Mmu-Mir-506-P21  Mmu-Mir-506-P22  Mmu-Mir-506-P23  Mmu-Mir-506-P24 
Orthologues Bta-Mir-506-P2b1  Bta-Mir-506-P2b2  Cfa-Mir-506-P2b  Cpo-Mir-506-P2b  Dno-Mir-506-P2b  Eca-Mir-506-P2b3  Eca-Mir-506-P2b4  Hsa-Mir-506-P2b  Laf-Mir-506  Mml-Mir-506-P2b  Mmr-Mir-506-P2b  Pab-Mir-506-P2b  Rno-Mir-506-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 67988383-67988440 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P2b)
Mir-506-P4 chrX: 67988099-67988156 [-] UCSC Ensembl
Mir-506-P2b chrX: 67988383-67988440 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCACCUUCACUCAUGUAGUGUGUGAUGUAUCACUUGAGGAUGUACCACCCAUUUAACAGGAAACAUGCUUGGUACAUCUUUGAGUGAGAUAACACACAACAGCUACCACCUCAAUACU
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Structure
        10          20        30        40        50        
GCACCUUCACUCAUGUAG--|     A   A     UG           CC  UUUAAC 
                    UGUGUG UGU UCACU  AGGAUGUACCA  CA      A
                    ACACAC AUA AGUGA  UUCUACAUGGU  GU      G
UCAUAACUCCACCAUCGACA^     A   G     GU           UC  ACAAAG 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-506-P2b_5p*

mirBase accessionMIMAT0017210
Sequence
0- CACUUGAGGAUGUACCACCCA -21
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Proposed targets TargetScanVert: mmu-miR-547-5p
miRDB: MIMAT0017210
Mature sequence

Mmu-Mir-506-P2b_3p

mirBase accessionMIMAT0003173
Sequence
37- CUUGGUACAUCUUUGAGUGAG -58
Get sequence
Proposed targets microrna.org: MIMAT0003173
TargetScanVert: mmu-miR-547-3p
miRDB: MIMAT0003173