MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-506-P2b

Family name MIR-506 (all species)
Seed UUGGCAC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-506-P1o1  Mmr-Mir-506-P1o2  Mmr-Mir-506-P2a  Mmr-Mir-506-P3  Mmr-Mir-506-P4  Mmr-Mir-506-P5  Mmr-Mir-506-P6o5  Mmr-Mir-506-P6o6  Mmr-Mir-506-P6o7  Mmr-Mir-506-P6o8 
Orthologues Bta-Mir-506-P2b1  Bta-Mir-506-P2b2  Cfa-Mir-506-P2b  Cpo-Mir-506-P2b  Dno-Mir-506-P2b  Eca-Mir-506-P2b3  Eca-Mir-506-P2b4  Hsa-Mir-506-P2b  Laf-Mir-506  Mml-Mir-506-P2b  Mmu-Mir-506-P2b  Pab-Mir-506-P2b  Rno-Mir-506-P2b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 124102496-124102553 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCUUUAGCCAUGCUGUGUGUAGUGUUCCACUUCAGGAAGUGUCAUCUAUGUGGCUAGAAAUAUGAUUGGCACCUCUUAGAGUGAAAUAAUGCACAACAGGUACGACCUCAGUACU
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Structure
        10          20        30        40         50        
CUGCCUUUAGCCAUGCUG--      G    C    UC    A     -|  UAUGUGGC 
                    UGUGUA UGUU CACU  AGGA GUGUC AUC        \
                    ACACGU AUAA GUGA  UUCU CACGG UAG        U
UCAUGACUCCAGCAUGGACA      A    A    GA    C     U^  UAUAAAGA 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-506-P2b_5p* (predicted)

mirBase accessionNone
Sequence
0- CACUUCAGGAAGUGUCAUCU -20
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Mature sequence

Mmr-Mir-506-P2b_3p (predicted)

mirBase accessionNone
Sequence
37- AUUGGCACCUCUUAGAGUGAA -58
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