| MirGeneDB ID | Bta-Mir-506-P2b1 |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | ACUUCAG |
| Species | Cow (Bos taurus) |
| MiRBase ID | |
| Paralogues | Bta-Mir-506-P2a Bta-Mir-506-P2b2 Bta-Mir-506-P3 Bta-Mir-506-P4 Bta-Mir-506-P5 |
| Orthologues | Cfa-Mir-506-P2b Cpo-Mir-506-P2b Dno-Mir-506-P2b Hsa-Mir-506-P2b Laf-Mir-506 Mml-Mir-506-P2b Mmr-Mir-506-P2b Mmu-Mir-506-P2b Pab-Mir-506-P2b Rno-Mir-506-P2b |
| Node of Origin (locus) | B. taurus |
| Node of Origin (family) | Eutheria |
| Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 29998359-29998416 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCACGUUUCACUAUGCUGCGUGCAGUGCUGCACUUCAGGAAGUGCCAUCCAUGUGGAUAAAAAUAUGAUUGGUACUUCUUAGAGUGGAGCAAUACACAGCAAAUCCAUCAGUGCUGACGet precursor sequence |
| Structure | 10 20 30 40 50 CCACGUUUCACUAUGCU- -| CAG G UC UC UGUGGA GC GUG UGCU CACU AGGAAGUGCCA CA U CG CAC ACGA GUGA UUCUUCAUGGU GU A CAGUCGUGACUACCUAAA A^ AUA G GA UA AUAAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Bta-Mir-506-P2b1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CACUUCAGGAAGUGCCAUCCA -21
Get sequence
|
| Star sequence | Bta-Mir-506-P2b1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AUUGGUACUUCUUAGAGUGGA -58
Get sequence
|
