| MirGeneDB ID | Dno-Mir-506-P2b |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | UUGGCAU |
| Species | Nine-banded armadillo (Dasypus novemcinctus) |
| MiRBase ID | dno-mir-507 |
| Paralogues | Dno-Mir-506-P1i Dno-Mir-506-P1j Dno-Mir-506-P1k Dno-Mir-506-P1l Dno-Mir-506-P3 Dno-Mir-506-P4 |
| Orthologues | Bta-Mir-506-P2b1 Bta-Mir-506-P2b2 Cfa-Mir-506-P2b Cpo-Mir-506-P2b Eca-Mir-506-P2b3 Eca-Mir-506-P2b4 Hsa-Mir-506-P2b Laf-Mir-506 Mml-Mir-506-P2b Mmr-Mir-506-P2b Mmu-Mir-506-P2b Pab-Mir-506-P2b Rno-Mir-506-P2b |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (dasNov3) |
JH564535: 655807-655864 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P2b) |
Mir-506-P2b
JH564535: 655807-655864 [+]
UCSC
Ensembl
Mir-506-P3 JH564535: 697744-697800 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAUUUUCAUCUGUGCUGUGUGCAGUGCCCCCACUCCAGGAAGUGCCAUCCAUGUGGCUAAAAAUAUGAUUGGCAUUUCUUAGAGUGAAGUAAUGCACAACGUGUACAACAUAGGAGUGGet precursor sequence |
| Structure | 10 20 30 40 50 CAUUUUCAUCUGUGCUG---| G CCC C UC UGUGGC UGUGCA UGC CACUC AGGAAGUGCCA CA U ACACGU AUG GUGAG UUCUUUACGGU GU A GUGAGGAUACAACAUGUGCA^ A AA- A UA AUAAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Dno-Mir-506-P2b_5p* (predicted) |
| mirBase accession | MIMAT0047952 |
| Sequence |
0- CACUCCAGGAAGUGCCAUCCA -21
Get sequence
|
| Mature sequence | Dno-Mir-506-P2b_3p (predicted) |
| mirBase accession | MIMAT0047953 |
| Sequence |
37- AUUGGCAUUUCUUAGAGUGAA -58
Get sequence
|
