MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-506-P1k

Family name MIR-506 (all species)
Seed GACUGGC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues Dno-Mir-506-P1i  Dno-Mir-506-P1j  Dno-Mir-506-P1l  Dno-Mir-506-P2b  Dno-Mir-506-P3  Dno-Mir-506-P4 
Orthologues Cfa-Mir-506-P1  Laf-Mir-506  Rno-Mir-506-P1 
Node of Origin (locus) D. novemcinctus
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH564535: 690101-690158 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P1k)		 Mir-506-P2b JH564535: 655807-655864 [+] UCSC Ensembl
Mir-506-P3 JH564535: 697744-697800 [+] UCSC Ensembl
Mir-506-P1l JH564535: 715717-715774 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAUCUUCAACAUUCUGUGUGUGGUACCCUACUCCAGAGCGUGGCAAUCAUGUAUAAUUAAAUGUGACUGGCACCUCUGUGAGUGGAGUAACACAUGACAUGUACAACAUAUAUGAU
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Structure
        10          20        30         40        50        
UUCAUCUUCAACAUUCU-  -     G   C      -|    C   G  A    GUAUA 
                  GU GUGUG UAC CUACUC CAGAG GUG CA UCAU     A
                  CA UACAC AUG GGUGAG GUCUC CAC GU AGUG     U
UAGUAUAUACAACAUGUA  G     A   A      U^    -   G  C    UAAAU 
      110       100        90        80         70        60
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Star sequence

Dno-Mir-506-P1k_5p*
mirBase accessionNone
Sequence 
0- UACUCCAGAGCGUGGCAAUCAUG -23
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Mature sequence

Dno-Mir-506-P1k_3p
mirBase accessionNone
Sequence 
35- UGACUGGCACCUCUGUGAGUGGA -58
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