| MirGeneDB ID | Dno-Mir-506-P1i |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | UUGACAC |
| Species | Nine-banded armadillo (Dasypus novemcinctus) |
| MiRBase ID | |
| Paralogues | Dno-Mir-506-P1j Dno-Mir-506-P1k Dno-Mir-506-P1l Dno-Mir-506-P2b Dno-Mir-506-P3 Dno-Mir-506-P4 |
| Orthologues | Cfa-Mir-506-P1 Laf-Mir-506 Rno-Mir-506-P1 |
| Node of Origin (locus) | D. novemcinctus |
| Node of Origin (family) | Eutheria |
| Genome context (dasNov3) |
JH564535: 672065-672122 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P1i) |
Mir-506-P2b
JH564535: 655807-655864 [+]
UCSC
Ensembl
Mir-506-P3 JH564535: 697744-697800 [+] UCSC Ensembl Mir-506-P1l JH564535: 715717-715774 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGAUCUUCAAGCAUACUGUGUGUGGUACCCUACUCCAGAGAGUGACAAUCACGUAUAAGUAAAUAUGAUUGACACCUCUGAGAGUGGAGUAAUGCAUGACAUAUACGACAUAUGUGAUGet precursor sequence |
| Structure | 10 20 30 40 50 CGAUCUUCAAGCAUACU- - GG C -| A A CGUAUA GU GUGU UAC CUACUC CAGAG GUG CAAUCA A CA UACG AUG GGUGAG GUCUC CAC GUUAGU G UAGUGUAUACAGCAUAUA G UA A A^ - A AUAAAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Dno-Mir-506-P1i_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UACUCCAGAGAGUGACAAUCA -21
Get sequence
|
| Mature sequence | Dno-Mir-506-P1i_3p |
| mirBase accession | None |
| Sequence |
37- AUUGACACCUCUGAGAGUGGA -58
Get sequence
|
