MirGeneDB ID | Bta-Mir-506-P2b2 |
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Family name | MIR-506 (all species) |
Seed | ACUUCAG |
Species | Cow (Bos taurus) |
MiRBase ID | |
Paralogues | Bta-Mir-506-P2a Bta-Mir-506-P2b1 Bta-Mir-506-P3 Bta-Mir-506-P4 Bta-Mir-506-P5 |
Orthologues | Cfa-Mir-506-P2b Cpo-Mir-506-P2b Dno-Mir-506-P2b Hsa-Mir-506-P2b Laf-Mir-506 Mml-Mir-506-P2b Mmr-Mir-506-P2b Mmu-Mir-506-P2b Pab-Mir-506-P2b Rno-Mir-506-P2b |
Node of Origin (locus) | B. taurus |
Node of Origin (family) | Eutheria |
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 29994643-29994700 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CCACGUUUCACUAUGCUGCGUGCAGUGCUGCACUUCAGGAAGUGCCAUCCAUGUGGAUAGAAAUAUGAUUGGCAUUUCUUAGAGUGGAGCAAUACACAGCAAAUCCAUCAGUGCUGACGet precursor sequence |
Structure | 10 20 30 40 50 CCACGUUUCACUAUGCU- -| CAG G UC UC UGUGGA GC GUG UGCU CACU AGGAAGUGCCA CA U CG CAC ACGA GUGA UUCUUUACGGU GU A CAGUCGUGACUACCUAAA A^ AUA G GA UA AUAAAG 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Mature sequence | Bta-Mir-506-P2b2_5p (predicted) |
mirBase accession | None |
Sequence |
0- CACUUCAGGAAGUGCCAUCCA -21
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|
Star sequence | Bta-Mir-506-P2b2_3p* (predicted) |
mirBase accession | None |
Sequence |
37- AUUGGCAUUUCUUAGAGUGGA -58
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