MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-506-P4b

Family name MIR-506 (all species)
Seed ACUUAGG
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-506-P2a  Bta-Mir-506-P2b1  Bta-Mir-506-P2b2  Bta-Mir-506-P3  Bta-Mir-506-P5 
Orthologues Cfa-Mir-506-P4b  Cja-Mir-506-P4  Cpo-Mir-506-P4  Dno-Mir-506-P4  Eca-Mir-506-P4b  Hsa-Mir-506-P4  Laf-Mir-506  Mml-Mir-506-P4  Mmr-Mir-506-P4  Mmu-Mir-506-P4  Ocu-Mir-506-P4  Pab-Mir-506-P4  Rno-Mir-506-P4 
Node of Origin (locus) Scrotifera
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 29994350-29994407 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCUUCACCUGUGUUUUGCUCAGUGCCCUACUUAGGAAGGCGUUAUUCACUUAUAUUGAAUUUUGAAAGGCAUCUCUCUGAGUGUAGCAAUGUGUAAUAUGAACAACAUUUGAGGU
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Structure
        10          20        30        40        50        
CCACCUUCACCUGUGUU--|   U  G   CC       GA  GC  UA    CUUAUA 
                   UUGC CA UGC  UACUUAG  AG  GU  UUCA      U
                   AAUG GU ACG  GUGAGUC  UC  CG  AAGU      U
UGGAGUUUACAACAAGUAU^   U  A   AU       UC  UA  GA    UUUAAG 
      110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-506-P4b_5p (predicted)
mirBase accessionNone
Sequence 
0- UACUUAGGAAGGCGUUAUUCA -21
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Star sequence

Bta-Mir-506-P4b_3p* (predicted)
mirBase accessionNone
Sequence 
37- AAAGGCAUCUCUCUGAGUGUA -58
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