MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-506-P3

Family name MIR-506 (all species)
Seed UUGUCAC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-506-P1o1  Mmr-Mir-506-P1o2  Mmr-Mir-506-P2a  Mmr-Mir-506-P2b  Mmr-Mir-506-P4  Mmr-Mir-506-P5  Mmr-Mir-506-P6o5  Mmr-Mir-506-P6o6  Mmr-Mir-506-P6o7  Mmr-Mir-506-P6o8 
Orthologues Bta-Mir-506-P3  Cfa-Mir-506-P3a  Cfa-Mir-506-P3b  Cja-Mir-506-P3  Dno-Mir-506-P3  Eca-Mir-506-P3  Hsa-Mir-506-P3  Laf-Mir-506  Mml-Mir-506-P3  Ocu-Mir-506-P3  Pab-Mir-506-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 124122426-124122485 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCUGCAGUCUUCAGCUGCCUGUAGUACCCUACUCCAGAGAGUGACACUCAACAUAGACUAAAACAUGAUUGUCACCCUUUCUGAGUAGAAUAAUUCACAUCAUGUAUGAAAUAUGCAUU
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Structure
        10        20          30        40          50         
GGCUGCAGUCUUCAGCUGCCUGUAGUACC--     C      --|     C   ACAUAGA 
                               CUACU CAGAGA  GUGACA UCA       \
                               GAUGA GUCUUU  CACUGU AGU       C
UUACGUAUAAAGUAUGUACUACACUUAAUAA     -      CC^     U   ACAAAAU 
.       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-506-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- UACUCCAGAGAGUGACACUCA -21
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Mature sequence

Mmr-Mir-506-P3_3p (predicted)

mirBase accessionNone
Sequence
38- AUUGUCACCCUUUCUGAGUAGA -60
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