MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-506-P1a2

Family name MIR-506 (all species)
Seed UUGACAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-514a-2
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6b  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Cfa-Mir-506-P1  Cja-Mir-506-P1a  Laf-Mir-506  Mml-Mir-506-P1a  Pab-Mir-506-P1a  Rno-Mir-506-P1 
Node of Origin (locus) H. sapiens
Node of Origin (family) Eutheria
Genome context
(hg38)		 chrX: 147284655-147284712 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P1a2)		 Mir-506-P3 chrX: 147236945-147237002 [-] UCSC Ensembl
Mir-506-P1e chrX: 147250161-147250218 [-] UCSC Ensembl
Mir-506-P1c3 chrX: 147258774-147258831 [-] UCSC Ensembl
Mir-506-P1c2 chrX: 147259661-147259717 [-] UCSC Ensembl
Mir-506-P1c1 chrX: 147260549-147260606 [-] UCSC Ensembl
Mir-506-P1b chrX: 147272342-147272399 [-] UCSC Ensembl
Mir-506-P1a3 chrX: 147279266-147279323 [-] UCSC Ensembl
Mir-506-P1a1 chrX: 147281957-147282014 [-] UCSC Ensembl
Mir-506-P1a2 chrX: 147284655-147284712 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUCCUUAAACAUGUUGUCUGUGGUACCCUACUCUGGAGAGUGACAAUCAUGUAUAACUAAAUUUGAUUGACACUUCUGUGAGUAGAGUAACGCAUGACACUUACGACAGACAAUGG
Get precursor sequence
Structure
        10         20         30         40        50        
CCAUCCUUAAACAUGUU-   -    G   C      -|   G    A      UGUAUA 
                  GUC UGUG UAC CUACUC UGGA AGUG CAAUCA      A
                  CAG ACGC AUG GAUGAG GUCU UCAC GUUAGU      C
GGUAACAGACAGCAUUCA   U    A   A      U^   -    A      UUAAAU 
      110       100        90        80         70        60
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Star sequence

Hsa-Mir-506-P1a2_5p*
mirBase accessionMIMAT0022702
Sequence 
0- UACUCUGGAGAGUGACAAUCA -21
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Proposed targets TargetScanVert: hsa-miR-514a-5p
TargetMiner: hsa-miR-514a-5p
miRDB: MIMAT0022702
Mature sequence

Hsa-Mir-506-P1a2_3p
mirBase accessionMIMAT0002883
Sequence 
37- AUUGACACUUCUGUGAGUAGA -58
Get sequence
Proposed targets microrna.org: MIMAT0002883
TargetScanVert: hsa-miR-514a-3p
TargetMiner: hsa-miR-514a-3p
miRDB: MIMAT0002883