| MirGeneDB ID | Hsa-Mir-506-P6d |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | ACUUGGA |
| Species | Human (Homo sapiens) |
| MiRBase ID | hsa-mir-890 |
| Paralogues | Hsa-Mir-506-P1a1 Hsa-Mir-506-P1a2 Hsa-Mir-506-P1a3 Hsa-Mir-506-P1b Hsa-Mir-506-P1c1 Hsa-Mir-506-P1c2 Hsa-Mir-506-P1c3 Hsa-Mir-506-P1d Hsa-Mir-506-P1e Hsa-Mir-506-P2b Hsa-Mir-506-P3 Hsa-Mir-506-P4 Hsa-Mir-506-P5a1 Hsa-Mir-506-P5a2 Hsa-Mir-506-P5b Hsa-Mir-506-P5c Hsa-Mir-506-P6a Hsa-Mir-506-P6b Hsa-Mir-506-P6c Hsa-Mir-506-P6e |
| Orthologues | Cja-Mir-506-P6d Laf-Mir-506 Mml-Mir-506-P6d Pab-Mir-506-P6d |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Eutheria |
| Genome context (hg38) |
chrX: 145994285-145994341 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P6d) |
Mir-506-P6e
chrX: 145992760-145992816 [-]
UCSC
Ensembl
Mir-506-P6d chrX: 145994285-145994341 [-] UCSC Ensembl Mir-506-P6c chrX: 145994794-145994850 [-] UCSC Ensembl Mir-506-P6b chrX: 145996678-145996734 [-] UCSC Ensembl Mir-506-P6a chrX: 145997208-145997264 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUACAAUCAGACAUGCUGUGGGAAGUGCCCUACUUGGAAAGGCAUCAGUUGCUUAGAUUACAUGUAACUAUUCCCUUUCUGAGUAGAGUAAGUCUUACCAAGUACAAGUUCAUGGUGGet precursor sequence |
| Structure | 10 20 30 40 50 CUACAAUCAGACAUGCU--| AG C UG CAUC UUAGA GUGGGA UGC CUACU GAAAGG AGUUGC \ CAUUCU AUG GAUGA CUUUCC UCAAUG U GUGGUACUUGAACAUGAAC^ GA A GU CUUA UACAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Mature sequence | Hsa-Mir-506-P6d_5p |
| mirBase accession | MIMAT0004912 |
| Sequence |
0- UACUUGGAAAGGCAUCAGUUGC -22
Get sequence
|
| Proposed targets |
microrna.org: MIMAT0004912 TargetScanVert: hsa-miR-890 TargetMiner: hsa-miR-890 miRDB: MIMAT0004912 |
| Star sequence | Hsa-Mir-506-P6d_3p* |
| mirBase accession | None |
| Sequence |
35- AACUAUUCCCUUUCUGAGUAGA -57
Get sequence
|
