| MirGeneDB ID | Mml-Mir-506-P6d |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | ACUGUUC |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-890 |
| Paralogues | Mml-Mir-506-P1a Mml-Mir-506-P1b Mml-Mir-506-P1c4 Mml-Mir-506-P1c5 Mml-Mir-506-P1c6 Mml-Mir-506-P1d Mml-Mir-506-P1e Mml-Mir-506-P2b Mml-Mir-506-P3 Mml-Mir-506-P4 Mml-Mir-506-P5o1 Mml-Mir-506-P5o2 Mml-Mir-506-P5o3 Mml-Mir-506-P5o4a Mml-Mir-506-P5o4b Mml-Mir-506-P6a Mml-Mir-506-P6b Mml-Mir-506-P6c Mml-Mir-506-P6e |
| Orthologues | Cja-Mir-506-P6d Hsa-Mir-506-P6d Laf-Mir-506 Pab-Mir-506-P6d |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 142032972-142033028 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P6d) |
Mir-506-P6e
CM014356.1: 142031479-142031535 [-]
UCSC
Ensembl
Mir-506-P6d CM014356.1: 142032972-142033028 [-] UCSC Ensembl Mir-506-P6c CM014356.1: 142033498-142033554 [-] UCSC Ensembl Mir-506-P6b CM014356.1: 142035052-142035108 [-] UCSC Ensembl Mir-506-P6a CM014356.1: 142035582-142035638 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUACAAUCAGUCAUGCUGUGGGCAAUGCCCUACUUGGAAAGGCACCAGUUACUUAGAUUACACGUAACUGUUCCCUUUCUGAGUAGAGUAAGGCUUACCAAGUACAAGUUCAUGGUGGet precursor sequence |
| Structure | 10 20 30 40 50 CUACAAUCAGUCAUGCU--| AA C UG CAC UUAGA GUGGGC UGC CUACU GAAAGG CAGUUAC \ CAUUCG AUG GAUGA CUUUCC GUCAAUG U GUGGUACUUGAACAUGAAC^ GA A GU CUU CACAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Mml-Mir-506-P6d_5p* |
| mirBase accession | MIMAT0006529 |
| Sequence |
0- UACUUGGAAAGGCACCAGUUAC -22
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-890-5p |
| Mature sequence | Mml-Mir-506-P6d_3p |
| mirBase accession | MIMAT0026913 |
| Sequence |
35- AACUGUUCCCUUUCUGAGUAGA -57
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-890-3p |
