| MirGeneDB ID | Mml-Mir-506-P6e |
|---|---|
| Family name | MIR-506 (all species) |
| Seed | ACUGUUU |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-892c |
| Paralogues | Mml-Mir-506-P1a Mml-Mir-506-P1b Mml-Mir-506-P1c4 Mml-Mir-506-P1c5 Mml-Mir-506-P1c6 Mml-Mir-506-P1d Mml-Mir-506-P1e Mml-Mir-506-P2b Mml-Mir-506-P3 Mml-Mir-506-P4 Mml-Mir-506-P5o1 Mml-Mir-506-P5o2 Mml-Mir-506-P5o3 Mml-Mir-506-P5o4a Mml-Mir-506-P5o4b Mml-Mir-506-P6a Mml-Mir-506-P6b Mml-Mir-506-P6c Mml-Mir-506-P6d |
| Orthologues | Cja-Mir-506-P6e Hsa-Mir-506-P6e Laf-Mir-506 Pab-Mir-506-P6e |
| Node of Origin (locus) | Simiiformes |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 142031479-142031535 [-] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-506-P6e) |
Mir-506-P6e
CM014356.1: 142031479-142031535 [-]
UCSC
Ensembl
Mir-506-P6d CM014356.1: 142032972-142033028 [-] UCSC Ensembl Mir-506-P6c CM014356.1: 142033498-142033554 [-] UCSC Ensembl Mir-506-P6b CM014356.1: 142035052-142035108 [-] UCSC Ensembl Mir-506-P6a CM014356.1: 142035582-142035638 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCACAAUCAGUCGUGCUGUGGGCAGUGCUCUAUUCAGAAAGGUGCCAGUCACUUAGAUUACAUGUCACUGUUUCCUUUCUGAGUGGAGUAAGGCUUACCAAGUACAAGUGUGUGGUGGet precursor sequence |
| Structure | 10 20 30 40 50 CCACAAUCAGUCGUGCU--| AG UGC C UUAGA GUGGGC UGCUCUAUUCAGAAAGG CAGU AC \ CAUUCG AUGAGGUGAGUCUUUCC GUCA UG U GUGGUGUGUGAACAUGAAC^ GA UUU C UACAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Mml-Mir-506-P6e_5p* |
| mirBase accession | MIMAT0028384 |
| Sequence |
0- UAUUCAGAAAGGUGCCAGUCAC -22
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-892c-5p |
| Mature sequence | Mml-Mir-506-P6e_3p |
| mirBase accession | MIMAT0028385 |
| Sequence |
35- CACUGUUUCCUUUCUGAGUGGA -57
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-892c-3p |
