MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-506-P5o2

Family name MIR-506 (all species)
Seed UCACAGG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-513a-2
Paralogues Mml-Mir-506-P1a  Mml-Mir-506-P1b  Mml-Mir-506-P1c4  Mml-Mir-506-P1c5  Mml-Mir-506-P1c6  Mml-Mir-506-P1d  Mml-Mir-506-P1e  Mml-Mir-506-P2b  Mml-Mir-506-P3  Mml-Mir-506-P4  Mml-Mir-506-P5o1  Mml-Mir-506-P5o3  Mml-Mir-506-P5o4a  Mml-Mir-506-P5o4b  Mml-Mir-506-P6a  Mml-Mir-506-P6b  Mml-Mir-506-P6c  Mml-Mir-506-P6d  Mml-Mir-506-P6e 
Orthologues Bta-Mir-506-P5  Cpo-Mir-506-P5  Laf-Mir-506  Mmr-Mir-506-P5  Ocu-Mir-506-P5  Rno-Mir-506-P5 
Node of Origin (locus) M. mulatta
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014356.1: 143261882-143261939 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P5o2)		 Mir-506-P5o4a CM014356.1: 143232188-143232245 [-] UCSC Ensembl
Mir-506-P5o4b CM014356.1: 143239333-143239390 [-] UCSC Ensembl
Mir-506-P5o3 CM014356.1: 143252920-143252977 [-] UCSC Ensembl
Mir-506-P5o2 CM014356.1: 143261882-143261939 [-] UCSC Ensembl
Mir-506-P5o1 CM014356.1: 143270447-143270504 [-] UCSC Ensembl
Mir-506-P4 CM014356.1: 143275369-143275425 [-] UCSC Ensembl
Mir-506-P2b CM014356.1: 143275695-143275752 [-] UCSC Ensembl
Mir-506-P3 CM014356.1: 143281565-143281622 [-] UCSC Ensembl
Mir-506-P1e CM014356.1: 143285603-143285660 [-] UCSC Ensembl
Mir-506-P1c5 CM014356.1: 143294073-143294130 [-] UCSC Ensembl
Mir-506-P1c4 CM014356.1: 143294958-143295015 [-] UCSC Ensembl
Mir-506-P1b CM014356.1: 143303098-143303155 [-] UCSC Ensembl
Mir-506-P1a CM014356.1: 143309725-143309782 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUCAGCCAUUCAGUGUACAGUGCCUUUCACAGGGAGGUGUCAUUUAUGUGAACUAAAAUAUAAAUUUCACCUUUCUGAGAAGAGUAAUGUACAACAUGCACUGCAUAUGUGGU
Get precursor sequence
Structure
        10          20        30        40        50        
CCACAUUCAGCCAUUCAG--|     G   C    A   GG     UC       UGAA 
                    UGUACA UGC UUUC CAG  AGGUG  AUUUAUG    C
                    ACAUGU AUG GAAG GUC  UCCAC  UAAAUAU    U
UGGUGUAUACGUCACGUACA^     A   A    A   UU     UU       AAAA 
      110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Mature sequence

Mml-Mir-506-P5o2_5p
mirBase accessionMIMAT0005768
Sequence 
0- UUCACAGGGAGGUGUCAUUUAUG -23
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Proposed targets TargetScanVert: mml-miR-513a
Star sequence

Mml-Mir-506-P5o2_3p*
mirBase accessionNone
Sequence 
35- UAAAUUUCACCUUUCUGAGAAGA -58
Get sequence