MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-506-P6b

Family name MIR-506 (all species)
Seed ACUGUGU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-892a
Paralogues Hsa-Mir-506-P1a1  Hsa-Mir-506-P1a2  Hsa-Mir-506-P1a3  Hsa-Mir-506-P1b  Hsa-Mir-506-P1c1  Hsa-Mir-506-P1c2  Hsa-Mir-506-P1c3  Hsa-Mir-506-P1d  Hsa-Mir-506-P1e  Hsa-Mir-506-P2b  Hsa-Mir-506-P3  Hsa-Mir-506-P4  Hsa-Mir-506-P5a1  Hsa-Mir-506-P5a2  Hsa-Mir-506-P5b  Hsa-Mir-506-P5c  Hsa-Mir-506-P6a  Hsa-Mir-506-P6c  Hsa-Mir-506-P6d  Hsa-Mir-506-P6e 
Orthologues Cja-Mir-506-P6b  Laf-Mir-506  Mml-Mir-506-P6b  Pab-Mir-506-P6b 
Node of Origin (locus) Simiiformes
Node of Origin (family) Eutheria
Genome context
(hg38)
chrX: 145996678-145996734 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P6b)
Mir-506-P6e chrX: 145992760-145992816 [-] UCSC Ensembl
Mir-506-P6d chrX: 145994285-145994341 [-] UCSC Ensembl
Mir-506-P6c chrX: 145994794-145994850 [-] UCSC Ensembl
Mir-506-P6b chrX: 145996678-145996734 [-] UCSC Ensembl
Mir-506-P6a chrX: 145997208-145997264 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCACAAUCAGCCAUGCUGUGGGCAGUGCCUUACUCAGAAAGGUGCCAGUCACUUACACUACAUGUCACUGUGUCCUUUCUGCGUAGAGUAAGGCUCACUAAGUACAAGUUUGUGGUG
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Structure
        10          20        30        40         50        
UCACAAUCAGCCAUGCU--|     AG   C    U        U  -    C  UUACA 
                   GUGGGC  UGC UUAC CAGAAAGG GC CAGU AC     \
                   CACUCG  AUG GAUG GUCUUUCC UG GUCA UG     C
GUGGUGUUUGAACAUGAAU^     GA   A    C        -  U    C  UACAU 
     110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-506-P6b_5p*

mirBase accessionNone
Sequence
0- UACUCAGAAAGGUGCCAGUCAC -22
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Mature sequence

Hsa-Mir-506-P6b_3p

mirBase accessionMIMAT0004907
Sequence
35- CACUGUGUCCUUUCUGCGUAGA -57
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Proposed targets microrna.org: MIMAT0004907
TargetScanVert: hsa-miR-892a
TargetMiner: hsa-miR-892a
miRDB: MIMAT0004907