MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-506-P6b

Family name MIR-506 (all species)
Seed ACUGUGU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-506-P1a  Pab-Mir-506-P1b  Pab-Mir-506-P1c7  Pab-Mir-506-P1c8  Pab-Mir-506-P1c9  Pab-Mir-506-P1c10  Pab-Mir-506-P1c11  Pab-Mir-506-P1c12  Pab-Mir-506-P1c13  Pab-Mir-506-P1d  Pab-Mir-506-P1e  Pab-Mir-506-P2b  Pab-Mir-506-P3  Pab-Mir-506-P4  Pab-Mir-506-P5o5  Pab-Mir-506-P5o6  Pab-Mir-506-P5o7  Pab-Mir-506-P5o8  Pab-Mir-506-P6a  Pab-Mir-506-P6c  Pab-Mir-506-P6d  Pab-Mir-506-P6e 
Orthologues Cja-Mir-506-P6b  Hsa-Mir-506-P6b  Laf-Mir-506  Mml-Mir-506-P6b 
Node of Origin (locus) Simiiformes
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 152291434-152291490 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCACAAUCAGCCAUGCUGUGGACAGUGCCCUACUUAGAAAGGUGCCAGUCACUUACACUACAUGUCACUGUGUCCUUUCUGUGUAGAGUAAGGCUCACUAAGUACAAGUUUGUGGUG
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Structure
        10          20        30        40         50        
UCACAAUCAGCCAUGCU--|   ACAG   C    U        U  -    C  UUACA 
                   GUGG    UGC CUAC UAGAAAGG GC CAGU AC     \
                   CACU    AUG GAUG GUCUUUCC UG GUCA UG     C
GUGGUGUUUGAACAUGAAU^   CGGA   A    U        -  U    C  UACAU 
     110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-506-P6b_5p* (predicted)

mirBase accessionNone
Sequence
0- UACUUAGAAAGGUGCCAGUCAC -22
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Mature sequence

Pab-Mir-506-P6b_3p (predicted)

mirBase accessionNone
Sequence
35- CACUGUGUCCUUUCUGUGUAGA -57
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