MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-506-P2a

Family name MIR-506 (all species)
Seed UUGGCAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-507b
Paralogues Cfa-Mir-506-P1  Cfa-Mir-506-P2b  Cfa-Mir-506-P3a  Cfa-Mir-506-P3b  Cfa-Mir-506-P4b 
Orthologues Bta-Mir-506-P2a  Cja-Mir-506-P2a  Cpo-Mir-506-P2a1  Cpo-Mir-506-P2a2  Eca-Mir-506-P2a  Laf-Mir-506  Mmr-Mir-506-P2a  Ocu-Mir-506-P2a 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 115665393-115665450 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P2a)		 Mir-506-P4b chrX: 115652425-115652482 [-] UCSC Ensembl
Mir-506-P2b chrX: 115652721-115652779 [-] UCSC Ensembl
Mir-506-P3b chrX: 115658398-115658456 [-] UCSC Ensembl
Mir-506-P3a chrX: 115658609-115658666 [-] UCSC Ensembl
Mir-506-P2a chrX: 115665393-115665450 [-] UCSC Ensembl
Mir-506-P1 chrX: 115688019-115688076 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUUUAACCAAACUUUGUGCAGUGCCCCAUUCAAAAAGGUGCCAUUCAGGUAUACUAAAAUAUGAUUGGCACUUUUUUGAGUGUGGUAAUUCACAACAUGUACAACCACAAGUGG
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Structure
        10          20        30        40        50        
CCACAUUUAACCAAACU--|    CAG    C                 U   GGUAUA 
                   UUGUG   UGCC CAUUCAAAAAGGUGCCA UCA      C
                   AACAC   AUGG GUGAGUUUUUUCACGGU AGU      U
GGUGAACACCAACAUGUAC^    UUA    U                 U   AUAAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-506-P2a_5p*
mirBase accessionNone
Sequence 
0- CAUUCAAAAAGGUGCCAUUCA -21
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Mature sequence

Cfa-Mir-506-P2a_3p
mirBase accessionMIMAT0034416
Sequence 
37- AUUGGCACUUUUUUGAGUGUG -58
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Proposed targets TargetScanVert: cfa-miR-507b
miRDB: MIMAT0034416