MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-574

Family name MIR-574 (all species)
Seed ACGCUCA
Species Cow (Bos taurus)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-574  Cpo-Mir-574  Dno-Mir-574  Ete-Mir-574  Hsa-Mir-574  Mml-Mir-574  Mmu-Mir-574  Ocu-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037333.1: 58092052-58092109 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGAGGGCCCCGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCAGGUCCACGCUCAUGCACACACCCACACGCCCGCACUCCUGCUCUGCCCCCUCGGCC
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Structure
        10          20        30        40        50         
GGCCGAGGGCCCCGCGU--|              AGU                 UGUCGC 
                   GGGUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                   CUCACGCCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCCCGUCUCGUC^              C--                 CUGGAC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-574_5p*

mirBase accessionNone
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
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Mature sequence

Bta-Mir-574_3p

mirBase accessionNone
Sequence
36- CACGCUCAUGCACACACCCACA -58
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