MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-574

Family name MIR-574 (all species)
Seed ACGCUCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-574
Paralogues
Orthologues Bta-Mir-574  Cfa-Mir-574  Cpo-Mir-574  Dno-Mir-574  Ete-Mir-574  Mml-Mir-574  Mmu-Mir-574  Ocu-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr4: 38868056-38868113 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGAGGGACCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCACACUCAGGGUCUGCCCCCUCGGCC
Get precursor sequence
Structure
        10          20        30        40        50         
GGCCGAGGGACCUGCGU--|    C         AGU                 UGUCGC 
                   GGGUG GGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                   CUCAC CCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCCCGUCUGGGA^    A         C--                 CUGGGC 
      110       100        90          80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-574_5p*

mirBase accessionMIMAT0004795
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
Proposed targets microrna.org: MIMAT0004795
TargetScanVert: hsa-miR-574-5p
TargetMiner: hsa-miR-574-5p
miRDB: MIMAT0004795
Mature sequence

Hsa-Mir-574_3p

mirBase accessionMIMAT0003239
Sequence
36- CACGCUCAUGCACACACCCACA -58
Get sequence
Proposed targets microrna.org: MIMAT0003239
TargetScanVert: hsa-miR-574-3p
TargetMiner: hsa-miR-574-3p
miRDB: MIMAT0003239