| MirGeneDB ID | Laf-Mir-574 |
|---|---|
| Family name | MIR-574 (all species) |
| Seed | GAGUGUG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-574 Cfa-Mir-574 Cja-Mir-574 Cpo-Mir-574 Dno-Mir-574 Eca-Mir-574 Ete-Mir-574 Hsa-Mir-574 Mml-Mir-574 Mmr-Mir-574 Mmu-Mir-574 Ocu-Mir-574 Pab-Mir-574 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010128.1: 279587-279650 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUUGGGUUUAAAUGUGUUUCCAUGGGAGGUGAGUGUGUGUGUGUGAGUGUGUGUGUGUCUUAAGCGCAAUUGGGCAACGCACAAGCACUUCCCACAUAUCUCACUCCCCUCUGGGGAACUACUGet precursor sequence |
| Structure | 10 20 30 40 50 CCUUGGGUUUAAAUGUGUUUCCA------ AG -| G GUGUGUGUGUG UGGGAGGUG UGUGUG UGU UGA \ ACCCUUCAC ACACGC ACG GUU U UCAUCAAGGGGUCUCCCCUCACUCUAUAC GA A^ G AACGCGAAUUC 120 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UGUG in loop |
| Mature sequence | Laf-Mir-574_5p |
| mirBase accession | None |
| Sequence |
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
|
| Star sequence | Laf-Mir-574_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- UGGGCAACGCACAAGCACUUCCC -64
Get sequence
|
