| MirGeneDB ID | Cja-Mir-574 |
|---|---|
| Family name | MIR-574 (all species) |
| Seed | GAGUGUG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-574 Cfa-Mir-574 Cpo-Mir-574 Dno-Mir-574 Eca-Mir-574 Ete-Mir-574 Hsa-Mir-574 Laf-Mir-574 Mml-Mir-574 Mmr-Mir-574 Mmu-Mir-574 Ocu-Mir-574 Pab-Mir-574 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021917.1: 151103664-151103721 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCACUCAGGGUCUGCCCCCUCGGCCGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCGAGGGCCCUGCGU--| AGU UGUCGC GGGUGCGGGCGUGUG GUGUGUGUGUGAGUGUG U CUCACGCCCGCACAC CACACACGUACUCGCAC C CCGGCUCCCCCGUCUGGGA^ C-- CUGGGC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-574_5p |
| mirBase accession | None |
| Sequence |
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
|
| Star sequence | Cja-Mir-574_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- CACGCUCAUGCACACACCCACA -58
Get sequence
|
