MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-574

Family name MIR-574 (all species)
Seed GAGUGUG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-574  Cfa-Mir-574  Cpo-Mir-574  Dno-Mir-574  Eca-Mir-574  Ete-Mir-574  Hsa-Mir-574  Laf-Mir-574  Mml-Mir-574  Mmr-Mir-574  Mmu-Mir-574  Ocu-Mir-574  Pab-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021917.1: 151103664-151103721 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCACUCAGGGUCUGCCCCCUCGGCC
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Structure
        10          20        30        40        50         
GGCCGAGGGCCCUGCGU--|              AGU                 UGUCGC 
                   GGGUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                   CUCACGCCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCCCGUCUGGGA^              C--                 CUGGGC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-574_5p
mirBase accessionNone
Sequence 
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
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Star sequence

Cja-Mir-574_3p* (predicted)
mirBase accessionNone
Sequence 
36- CACGCUCAUGCACACACCCACA -58
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