MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-574

Family name MIR-574 (all species)
Seed ACGCUCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-574
Paralogues
Orthologues Bta-Mir-574  Cfa-Mir-574  Cja-Mir-574  Cpo-Mir-574  Dno-Mir-574  Eca-Mir-574  Ete-Mir-574  Hsa-Mir-574  Laf-Mir-574  Mml-Mir-574  Mmr-Mir-574  Ocu-Mir-574  Pab-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chr5: 64970328-64970385 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCAAGUCCACGCUCAUGCACACACCCACACGCCCGCACGCCCGGUCUGCACCCUCGUCC
Get precursor sequence
Structure
        10          20        30        40        50         
GGCCGAGGGCCCUGCGU-  -|            AGU                 UGUCGC 
                  GG GUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                  CC CACGCCCGCACAC   CACACACGUACUCGCAC      C
CCUGCUCCCACGUCUGGC  G^            C--                 CUGAAC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Star sequence

Mmu-Mir-574_5p*

mirBase accessionMIMAT0004893
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
Proposed targets microrna.org: MIMAT0004893
TargetScanVert: mmu-miR-574-5p
miRDB: MIMAT0004893
Mature sequence

Mmu-Mir-574_3p

mirBase accessionMIMAT0004894
Sequence
36- CACGCUCAUGCACACACCCACA -58
Get sequence
Proposed targets microrna.org: MIMAT0004894
TargetScanVert: mmu-miR-574-3p
miRDB: MIMAT0004894